Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.4■□□□□ 0.22
KDELR3O43731 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDELR3O43731 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
KDELR3O43731 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDELR3O43731 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDELR3O43731 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDELR3O43731 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
KDELR3O43731 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KDELR3O43731 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.4■□□□□ 0.22
KDELR3O43731 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.39■□□□□ 0.22
KDELR3O43731 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
KDELR3O43731 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
KDELR3O43731 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KDELR3O43731 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.39■□□□□ 0.21
KDELR3O43731 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
KDELR3O43731 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
KDELR3O43731 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KDELR3O43731 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KDELR3O43731 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KDELR3O43731 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KDELR3O43731 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KDELR3O43731 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KDELR3O43731 MIR770-201ENST00000390219 98 ntBASIC16.39■□□□□ 0.21
KDELR3O43731 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.39■□□□□ 0.21
KDELR3O43731 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
KDELR3O43731 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KDELR3O43731 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
KDELR3O43731 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.39■□□□□ 0.21
KDELR3O43731 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
KDELR3O43731 TEX28P1-201ENST00000613479 1221 ntBASIC16.39■□□□□ 0.21
KDELR3O43731 TEX28P2-201ENST00000617764 1221 ntBASIC16.39■□□□□ 0.21
KDELR3O43731 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
KDELR3O43731 AL590560.3-201ENST00000623350 461 ntBASIC16.39■□□□□ 0.21
KDELR3O43731 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KDELR3O43731 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
KDELR3O43731 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
KDELR3O43731 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.39■□□□□ 0.21
KDELR3O43731 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.39■□□□□ 0.21
KDELR3O43731 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
KDELR3O43731 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
KDELR3O43731 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KDELR3O43731 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KDELR3O43731 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
KDELR3O43731 AC134407.2-201ENST00000625089 1978 ntBASIC16.38■□□□□ 0.21
KDELR3O43731 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.38■□□□□ 0.21
KDELR3O43731 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
KDELR3O43731 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
KDELR3O43731 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
KDELR3O43731 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
KDELR3O43731 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.38■□□□□ 0.21
KDELR3O43731 AC241585.1-201ENST00000433527 519 ntBASIC16.38■□□□□ 0.21
KDELR3O43731 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.38■□□□□ 0.21
KDELR3O43731 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.38■□□□□ 0.21
KDELR3O43731 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.38■□□□□ 0.21
KDELR3O43731 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.38■□□□□ 0.21
KDELR3O43731 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
KDELR3O43731 AL355385.1-201ENST00000606123 409 ntBASIC16.38■□□□□ 0.21
KDELR3O43731 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.38■□□□□ 0.21
KDELR3O43731 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.38■□□□□ 0.21
KDELR3O43731 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 AL513523.2-202ENST00000427283 2040 ntBASIC16.38■□□□□ 0.21
KDELR3O43731 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.38■□□□□ 0.21
KDELR3O43731 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.38■□□□□ 0.21
KDELR3O43731 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KDELR3O43731 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KDELR3O43731 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KDELR3O43731 KRT8P37-201ENST00000451609 1420 ntBASIC16.37■□□□□ 0.21
KDELR3O43731 AC100757.3-201ENST00000622361 1406 ntBASIC16.37■□□□□ 0.21
KDELR3O43731 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KDELR3O43731 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KDELR3O43731 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
KDELR3O43731 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KDELR3O43731 AC069224.1-201ENST00000566372 1715 ntBASIC16.37■□□□□ 0.21
KDELR3O43731 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.37■□□□□ 0.21
KDELR3O43731 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.37■□□□□ 0.21
KDELR3O43731 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
KDELR3O43731 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KDELR3O43731 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
KDELR3O43731 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KDELR3O43731 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms