Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SGCEO43556 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.44□□□□□ -0.1
SGCEO43556 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.44□□□□□ -0.1
SGCEO43556 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.44□□□□□ -0.1
SGCEO43556 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SGCEO43556 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SGCEO43556 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.44□□□□□ -0.1
SGCEO43556 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.44□□□□□ -0.1
SGCEO43556 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SGCEO43556 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.44□□□□□ -0.1
SGCEO43556 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.44□□□□□ -0.1
SGCEO43556 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.44□□□□□ -0.1
SGCEO43556 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.44□□□□□ -0.1
SGCEO43556 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.44□□□□□ -0.1
SGCEO43556 PDPK2P-202ENST00000562415 1191 ntBASIC14.44□□□□□ -0.1
SGCEO43556 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.44□□□□□ -0.1
SGCEO43556 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
SGCEO43556 AC068137.2-201ENST00000605408 478 ntBASIC14.44□□□□□ -0.1
SGCEO43556 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.44□□□□□ -0.1
SGCEO43556 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SGCEO43556 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SGCEO43556 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SGCEO43556 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SGCEO43556 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.44□□□□□ -0.1
SGCEO43556 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SGCEO43556 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
SGCEO43556 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
SGCEO43556 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SGCEO43556 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
SGCEO43556 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.44□□□□□ -0.1
SGCEO43556 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SGCEO43556 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SGCEO43556 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.43□□□□□ -0.1
SGCEO43556 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.43□□□□□ -0.1
SGCEO43556 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.43□□□□□ -0.1
SGCEO43556 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.43□□□□□ -0.1
SGCEO43556 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.43□□□□□ -0.1
SGCEO43556 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.43□□□□□ -0.1
SGCEO43556 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.43□□□□□ -0.1
SGCEO43556 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 AC074386.1-202ENST00000463561 864 ntBASIC14.43□□□□□ -0.1
SGCEO43556 KRT18P34-201ENST00000488218 1270 ntBASIC14.43□□□□□ -0.1
SGCEO43556 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.43□□□□□ -0.1
SGCEO43556 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.43□□□□□ -0.1
SGCEO43556 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.43□□□□□ -0.1
SGCEO43556 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.43□□□□□ -0.1
SGCEO43556 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.43□□□□□ -0.1
SGCEO43556 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
SGCEO43556 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.43□□□□□ -0.1
SGCEO43556 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
SGCEO43556 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SGCEO43556 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.43□□□□□ -0.1
SGCEO43556 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SGCEO43556 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SGCEO43556 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SGCEO43556 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.43□□□□□ -0.1
SGCEO43556 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SGCEO43556 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SGCEO43556 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SGCEO43556 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SGCEO43556 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SGCEO43556 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms