Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
ARHGEF9O43307 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.18■□□□□ 0.02
ARHGEF9O43307 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.18■□□□□ 0.02
ARHGEF9O43307 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
ARHGEF9O43307 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.18■□□□□ 0.02
ARHGEF9O43307 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.18■□□□□ 0.02
ARHGEF9O43307 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.18■□□□□ 0.02
ARHGEF9O43307 AC004832.2-201ENST00000426397 482 ntBASIC15.18■□□□□ 0.02
ARHGEF9O43307 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.18■□□□□ 0.02
ARHGEF9O43307 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.18■□□□□ 0.02
ARHGEF9O43307 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
ARHGEF9O43307 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.18■□□□□ 0.02
ARHGEF9O43307 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.18■□□□□ 0.02
ARHGEF9O43307 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.18■□□□□ 0.02
ARHGEF9O43307 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.18■□□□□ 0.02
ARHGEF9O43307 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.18■□□□□ 0.02
ARHGEF9O43307 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ARHGEF9O43307 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.17■□□□□ 0.02
ARHGEF9O43307 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARHGEF9O43307 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARHGEF9O43307 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.17■□□□□ 0.02
ARHGEF9O43307 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
ARHGEF9O43307 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ARHGEF9O43307 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
ARHGEF9O43307 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARHGEF9O43307 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.17■□□□□ 0.02
ARHGEF9O43307 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.17■□□□□ 0.02
ARHGEF9O43307 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARHGEF9O43307 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARHGEF9O43307 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARHGEF9O43307 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ARHGEF9O43307 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
ARHGEF9O43307 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
ARHGEF9O43307 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARHGEF9O43307 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARHGEF9O43307 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARHGEF9O43307 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.17■□□□□ 0.02
ARHGEF9O43307 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.17■□□□□ 0.02
ARHGEF9O43307 DUX4L17-201ENST00000557360 1267 ntBASIC15.17■□□□□ 0.02
ARHGEF9O43307 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.17■□□□□ 0.02
ARHGEF9O43307 AC134684.3-201ENST00000641758 218 ntBASIC15.17■□□□□ 0.02
ARHGEF9O43307 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARHGEF9O43307 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.17■□□□□ 0.02
ARHGEF9O43307 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARHGEF9O43307 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ARHGEF9O43307 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
ARHGEF9O43307 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARHGEF9O43307 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARHGEF9O43307 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARHGEF9O43307 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.17■□□□□ 0.02
ARHGEF9O43307 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.17■□□□□ 0.02
ARHGEF9O43307 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARHGEF9O43307 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.17■□□□□ 0.02
ARHGEF9O43307 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.17■□□□□ 0.02
ARHGEF9O43307 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.16■□□□□ 0.02
ARHGEF9O43307 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF9O43307 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.16■□□□□ 0.02
ARHGEF9O43307 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF9O43307 HLA-A-202ENST00000376806 1854 ntBASIC15.16■□□□□ 0.02
ARHGEF9O43307 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF9O43307 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.16■□□□□ 0.02
ARHGEF9O43307 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF9O43307 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.16■□□□□ 0.02
ARHGEF9O43307 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF9O43307 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF9O43307 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF9O43307 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF9O43307 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF9O43307 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF9O43307 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.16■□□□□ 0.02
ARHGEF9O43307 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.16■□□□□ 0.02
ARHGEF9O43307 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.16■□□□□ 0.02
ARHGEF9O43307 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.16■□□□□ 0.02
ARHGEF9O43307 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.16■□□□□ 0.02
ARHGEF9O43307 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.16■□□□□ 0.02
ARHGEF9O43307 AL589182.2-201ENST00000619332 1049 ntBASIC15.16■□□□□ 0.02
ARHGEF9O43307 MIR1199-201ENST00000621445 119 ntBASIC15.16■□□□□ 0.02
ARHGEF9O43307 PGM5P2-202ENST00000637225 1043 ntBASIC15.16■□□□□ 0.02
ARHGEF9O43307 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
ARHGEF9O43307 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ARHGEF9O43307 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms