Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SOX1O00570 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SOX1O00570 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SOX1O00570 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SOX1O00570 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SOX1O00570 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SOX1O00570 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SOX1O00570 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SOX1O00570 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.02■□□□□ 0.32
SOX1O00570 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SOX1O00570 AC097065.1-201ENST00000425737 517 ntBASIC17.02■□□□□ 0.32
SOX1O00570 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.02■□□□□ 0.32
SOX1O00570 KRT18P64-201ENST00000434946 1219 ntBASIC17.02■□□□□ 0.32
SOX1O00570 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.02■□□□□ 0.32
SOX1O00570 AC010234.1-201ENST00000494599 870 ntBASIC17.02■□□□□ 0.32
SOX1O00570 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SOX1O00570 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC17.02■□□□□ 0.32
SOX1O00570 CTBP2P4-201ENST00000513884 920 ntBASIC17.02■□□□□ 0.32
SOX1O00570 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.02■□□□□ 0.32
SOX1O00570 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.02■□□□□ 0.32
SOX1O00570 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.02■□□□□ 0.32
SOX1O00570 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.02■□□□□ 0.32
SOX1O00570 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SOX1O00570 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SOX1O00570 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.02■□□□□ 0.31
SOX1O00570 KRT8P39-201ENST00000396270 1433 ntBASIC17.02■□□□□ 0.31
SOX1O00570 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SOX1O00570 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SOX1O00570 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SOX1O00570 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SOX1O00570 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
SOX1O00570 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SOX1O00570 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SOX1O00570 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SOX1O00570 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SOX1O00570 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SOX1O00570 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SOX1O00570 AL138709.1-201ENST00000614840 1693 ntBASIC17.01■□□□□ 0.31
SOX1O00570 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SOX1O00570 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SOX1O00570 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SOX1O00570 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SOX1O00570 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SOX1O00570 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SOX1O00570 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SOX1O00570 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SOX1O00570 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.01■□□□□ 0.31
SOX1O00570 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.01■□□□□ 0.31
SOX1O00570 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SOX1O00570 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.01■□□□□ 0.31
SOX1O00570 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SOX1O00570 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC17.01■□□□□ 0.31
SOX1O00570 DGAT2L7P-201ENST00000602462 744 ntBASIC17.01■□□□□ 0.31
SOX1O00570 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SOX1O00570 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SOX1O00570 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SOX1O00570 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SOX1O00570 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SOX1O00570 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SOX1O00570 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SOX1O00570 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SOX1O00570 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SOX1O00570 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SOX1O00570 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SOX1O00570 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SOX1O00570 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SOX1O00570 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17■□□□□ 0.31
SOX1O00570 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SOX1O00570 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SOX1O00570 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17■□□□□ 0.31
SOX1O00570 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SOX1O00570 AC006277.1-201ENST00000624348 1610 ntBASIC17■□□□□ 0.31
SOX1O00570 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17■□□□□ 0.31
SOX1O00570 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SOX1O00570 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17■□□□□ 0.31
SOX1O00570 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SOX1O00570 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SOX1O00570 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SOX1O00570 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SOX1O00570 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17■□□□□ 0.31
SOX1O00570 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17■□□□□ 0.31
SOX1O00570 FAU-202ENST00000434372 533 ntTSL 2 BASIC17■□□□□ 0.31
SOX1O00570 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17■□□□□ 0.31
SOX1O00570 AC012618.1-201ENST00000461223 412 ntBASIC17■□□□□ 0.31
SOX1O00570 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17■□□□□ 0.31
SOX1O00570 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17■□□□□ 0.31
SOX1O00570 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SOX1O00570 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
SOX1O00570 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17■□□□□ 0.31
SOX1O00570 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17■□□□□ 0.31
SOX1O00570 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SOX1O00570 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17■□□□□ 0.31
SOX1O00570 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17■□□□□ 0.31
SOX1O00570 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17■□□□□ 0.31
SOX1O00570 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17■□□□□ 0.31
SOX1O00570 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17■□□□□ 0.31
SOX1O00570 AL645939.5-201ENST00000606834 243 ntBASIC17■□□□□ 0.31
SOX1O00570 AC006453.4-201ENST00000636949 1252 ntBASIC17■□□□□ 0.31
SOX1O00570 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SOX1O00570 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms