Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
O00370 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.33■□□□□ 0.36
O00370 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.33■□□□□ 0.36
O00370 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.33■□□□□ 0.36
O00370 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.33■□□□□ 0.36
O00370 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.33■□□□□ 0.36
O00370 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
O00370 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.33■□□□□ 0.36
O00370 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.33■□□□□ 0.36
O00370 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.33■□□□□ 0.36
O00370 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
O00370 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
O00370 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
O00370 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
O00370 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
O00370 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
O00370 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
O00370 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.32■□□□□ 0.36
O00370 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
O00370 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
O00370 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.32■□□□□ 0.36
O00370 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
O00370 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.32■□□□□ 0.36
O00370 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
O00370 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
O00370 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
O00370 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
O00370 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.32■□□□□ 0.36
O00370 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.32■□□□□ 0.36
O00370 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.32■□□□□ 0.36
O00370 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.32■□□□□ 0.36
O00370 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.32■□□□□ 0.36
O00370 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
O00370 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
O00370 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
O00370 AC027612.4-201ENST00000605371 583 ntBASIC17.32■□□□□ 0.36
O00370 AL596442.2-201ENST00000610240 980 ntBASIC17.32■□□□□ 0.36
O00370 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.32■□□□□ 0.36
O00370 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
O00370 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
O00370 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.32■□□□□ 0.36
O00370 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
O00370 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
O00370 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
O00370 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
O00370 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
O00370 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.32■□□□□ 0.36
O00370 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
O00370 AL365203.3-201ENST00000609742 2057 ntBASIC17.32■□□□□ 0.36
O00370 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.31■□□□□ 0.36
O00370 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
O00370 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.31■□□□□ 0.36
O00370 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
O00370 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.31■□□□□ 0.36
O00370 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.31■□□□□ 0.36
O00370 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
O00370 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.31■□□□□ 0.36
O00370 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.31■□□□□ 0.36
O00370 KRT18P32-201ENST00000424695 1287 ntBASIC17.31■□□□□ 0.36
O00370 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.31■□□□□ 0.36
O00370 GPS2P2-201ENST00000430745 888 ntBASIC17.31■□□□□ 0.36
O00370 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.31■□□□□ 0.36
O00370 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.31■□□□□ 0.36
O00370 AC006538.3-201ENST00000612495 578 ntBASIC17.31■□□□□ 0.36
O00370 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
O00370 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
O00370 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
O00370 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
O00370 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.31■□□□□ 0.36
O00370 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.31■□□□□ 0.36
O00370 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.31■□□□□ 0.36
O00370 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
O00370 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
O00370 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.3■□□□□ 0.36
O00370 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
O00370 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
O00370 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.3■□□□□ 0.36
O00370 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
O00370 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms