Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 BNIP3P1-202ENST00000550043 1585 ntBASIC14.32□□□□□ -0.12
NPIPB4C9JG80 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.32□□□□□ -0.12
NPIPB4C9JG80 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 AC046158.3-201ENST00000624947 2558 ntBASIC14.32□□□□□ -0.12
NPIPB4C9JG80 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 AC022532.1-201ENST00000624563 1728 ntBASIC14.32□□□□□ -0.12
NPIPB4C9JG80 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 SLC25A39P2-201ENST00000537614 270 ntBASIC14.31□□□□□ -0.12
NPIPB4C9JG80 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 RARRES2P9-201ENST00000565168 469 ntBASIC14.31□□□□□ -0.12
NPIPB4C9JG80 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.31□□□□□ -0.12
NPIPB4C9JG80 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPB4C9JG80 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPB4C9JG80 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB4C9JG80 AP3S2-216ENST00000617003 1561 ntBASIC14.3□□□□□ -0.12
NPIPB4C9JG80 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NPIPB4C9JG80 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPB4C9JG80 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB4C9JG80 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPB4C9JG80 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPB4C9JG80 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB4C9JG80 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB4C9JG80 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB4C9JG80 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB4C9JG80 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms