Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 AL645939.2-201ENST00000427340 991 ntBASIC11.44□□□□□ -0.58
LINC01546A6NGU7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 AC107918.2-201ENST00000530817 355 ntBASIC11.44□□□□□ -0.58
LINC01546A6NGU7 AP005901.3-202ENST00000581653 237 ntBASIC11.44□□□□□ -0.58
LINC01546A6NGU7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 MBLAC2-202ENST00000514906 1936 ntBASIC11.44□□□□□ -0.58
LINC01546A6NGU7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01546A6NGU7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 SLC25A6P2-201ENST00000497974 877 ntBASIC11.43□□□□□ -0.58
LINC01546A6NGU7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 AL139424.1-201ENST00000607572 797 ntBASIC11.43□□□□□ -0.58
LINC01546A6NGU7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.43□□□□□ -0.58
LINC01546A6NGU7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms