Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 MIR3180-1-201ENST00000580374 94 ntBASIC13.93□□□□□ -0.18
TMEM235A6NFC5 MIR3180-3-201ENST00000584616 94 ntBASIC13.93□□□□□ -0.18
TMEM235A6NFC5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 AL139288.1-201ENST00000623748 933 ntBASIC13.93□□□□□ -0.18
TMEM235A6NFC5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TMEM235A6NFC5 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 CICP13-201ENST00000422015 2789 ntBASIC13.92□□□□□ -0.18
TMEM235A6NFC5 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.92□□□□□ -0.18
TMEM235A6NFC5 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 AC139887.3-201ENST00000568585 713 ntBASIC13.92□□□□□ -0.18
TMEM235A6NFC5 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM235A6NFC5 MIR600HG-201ENST00000449175 5984 ntBASIC13.92□□□□□ -0.18
TMEM235A6NFC5 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 AL109954.1-202ENST00000564051 2148 ntBASIC13.91□□□□□ -0.18
TMEM235A6NFC5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 TMBIM7P-203ENST00000641617 1718 ntBASIC13.91□□□□□ -0.18
TMEM235A6NFC5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM235A6NFC5 PCED1CP-201ENST00000419887 785 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms