Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 FAM197Y7-201ENST00000432892 766 ntBASIC18.56■□□□□ 0.56
SSC5DA1L4H1 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 AC078819.1-201ENST00000547454 765 ntBASIC18.56■□□□□ 0.56
SSC5DA1L4H1 AC012085.1-201ENST00000548270 765 ntBASIC18.56■□□□□ 0.56
SSC5DA1L4H1 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.56■□□□□ 0.56
SSC5DA1L4H1 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.56■□□□□ 0.56
SSC5DA1L4H1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 AP001282.1-201ENST00000531301 1499 ntBASIC18.56■□□□□ 0.56
SSC5DA1L4H1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSC5DA1L4H1 AP001094.4-201ENST00000579008 2176 ntBASIC18.55■□□□□ 0.56
SSC5DA1L4H1 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 CALR4P-201ENST00000431943 946 ntBASIC18.55■□□□□ 0.56
SSC5DA1L4H1 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 AL590640.2-201ENST00000457038 527 ntBASIC18.55■□□□□ 0.56
SSC5DA1L4H1 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 AL450472.2-201ENST00000603663 1156 ntBASIC18.55■□□□□ 0.56
SSC5DA1L4H1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 AL008638.5-201ENST00000623814 1298 ntBASIC18.55■□□□□ 0.56
SSC5DA1L4H1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSC5DA1L4H1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms