Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 IGHV3-47-201ENST00000425060 335 ntBASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 AC087163.2-201ENST00000457299 853 ntBASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV18A0A075B6X5 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV18A0A075B6X5 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV18A0A075B6X5 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV18A0A075B6X5 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV18A0A075B6X5 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV18A0A075B6X5 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV18A0A075B6X5 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV18A0A075B6X5 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV18A0A075B6X5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV18A0A075B6X5 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV18A0A075B6X5 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV18A0A075B6X5 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TRAV18A0A075B6X5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV18A0A075B6X5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV18A0A075B6X5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV18A0A075B6X5 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV18A0A075B6X5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV18A0A075B6X5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV18A0A075B6X5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV18A0A075B6X5 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 DRAXINP1-201ENST00000437611 948 ntBASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 AC093827.2-201ENST00000512654 315 ntBASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 TPSP2-201ENST00000561760 610 ntBASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 AP001350.2-201ENST00000625104 1094 ntBASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms