Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 AC114501.2-201ENST00000439631 535 ntBASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 AC093004.1-201ENST00000508850 424 ntBASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 SDHAP3-202ENST00000515467 728 ntBASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 AGGF1P2-201ENST00000426656 2106 ntBASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 MIR6069-201ENST00000620069 79 ntBASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1G3Q9Y6M4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 KRT17P7-201ENST00000451704 1104 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms