Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HS3ST3A1Q9Y663 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HS3ST3A1Q9Y663 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HS3ST3A1Q9Y663 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 AL512384.1-201ENST00000406683 331 ntBASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 HAUS4P1-201ENST00000406739 1145 ntBASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 INE1-201ENST00000456273 945 ntBASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 ELK1P1-201ENST00000485699 580 ntBASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 GIMAP3P-201ENST00000495150 836 ntBASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 AC104596.2-201ENST00000512793 793 ntBASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HS3ST3A1Q9Y663 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 ALOX12P2-203ENST00000570921 1945 ntBASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 WASH4P-201ENST00000564273 1246 ntBASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HS3ST3A1Q9Y663 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HS3ST3A1Q9Y663 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.77■□□□□ 0.12
HS3ST3A1Q9Y663 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
HS3ST3A1Q9Y663 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.77■□□□□ 0.12
HS3ST3A1Q9Y663 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HS3ST3A1Q9Y663 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HS3ST3A1Q9Y663 FLJ38576-201ENST00000623820 2459 ntBASIC15.77■□□□□ 0.12
HS3ST3A1Q9Y663 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HS3ST3A1Q9Y663 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HS3ST3A1Q9Y663 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 271.2 ms