Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 PMS2P4-201ENST00000412466 1052 ntBASIC15.29■□□□□ 0.04
IFT52Q9Y366 AC079781.3-201ENST00000449110 356 ntBASIC15.29■□□□□ 0.04
IFT52Q9Y366 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 AL031432.2-201ENST00000566714 459 ntBASIC15.29■□□□□ 0.04
IFT52Q9Y366 AL928711.1-201ENST00000570165 459 ntBASIC15.29■□□□□ 0.04
IFT52Q9Y366 MIR4751-201ENST00000578027 74 ntBASIC15.29■□□□□ 0.04
IFT52Q9Y366 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 AL691432.3-201ENST00000621860 400 ntBASIC15.29■□□□□ 0.04
IFT52Q9Y366 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT52Q9Y366 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IFT52Q9Y366 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT52Q9Y366 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT52Q9Y366 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IFT52Q9Y366 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT52Q9Y366 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 AC138035.3-201ENST00000622706 2791 ntBASIC15.28■□□□□ 0.04
IFT52Q9Y366 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.28■□□□□ 0.04
IFT52Q9Y366 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT52Q9Y366 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT52Q9Y366 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 AL450487.1-201ENST00000426799 995 ntBASIC15.28■□□□□ 0.04
IFT52Q9Y366 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT52Q9Y366 AC108751.1-201ENST00000490852 363 ntBASIC15.28■□□□□ 0.04
IFT52Q9Y366 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT52Q9Y366 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT52Q9Y366 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT52Q9Y366 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT52Q9Y366 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IFT52Q9Y366 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT52Q9Y366 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IFT52Q9Y366 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT52Q9Y366 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
IFT52Q9Y366 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT52Q9Y366 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFT52Q9Y366 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFT52Q9Y366 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFT52Q9Y366 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.27■□□□□ 0.04
IFT52Q9Y366 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFT52Q9Y366 REXO1L8P-201ENST00000604378 1897 ntBASIC15.27■□□□□ 0.04
IFT52Q9Y366 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFT52Q9Y366 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFT52Q9Y366 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.27■□□□□ 0.04
IFT52Q9Y366 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.27■□□□□ 0.04
IFT52Q9Y366 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFT52Q9Y366 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
IFT52Q9Y366 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
IFT52Q9Y366 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
IFT52Q9Y366 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.27■□□□□ 0.04
IFT52Q9Y366 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFT52Q9Y366 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
IFT52Q9Y366 RNU1-129P-201ENST00000384064 167 ntBASIC15.27■□□□□ 0.04
IFT52Q9Y366 AL031284.1-201ENST00000419297 478 ntBASIC15.27■□□□□ 0.04
IFT52Q9Y366 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.27■□□□□ 0.04
IFT52Q9Y366 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.27■□□□□ 0.04
IFT52Q9Y366 AL513480.1-201ENST00000451731 511 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms