Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 AL627223.1-201ENST00000416693 442 ntBASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 KRT18P32-201ENST00000424695 1287 ntBASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 PCGF3-213ENST00000620529 1899 ntBASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 PCDHA1-201ENST00000378133 2726 ntBASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RPH3AQ9Y2J0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RPH3AQ9Y2J0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.96□□□□□ -0.02
RPH3AQ9Y2J0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.96□□□□□ -0.02
RPH3AQ9Y2J0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.96□□□□□ -0.02
RPH3AQ9Y2J0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RPH3AQ9Y2J0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RPH3AQ9Y2J0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RPH3AQ9Y2J0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.96□□□□□ -0.02
RPH3AQ9Y2J0 ALOX12P2-203ENST00000570921 1945 ntBASIC14.96□□□□□ -0.02
RPH3AQ9Y2J0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 AC023141.5-201ENST00000458585 616 ntBASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 PRYP6-201ENST00000514804 343 ntBASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 AC093520.2-201ENST00000561830 333 ntBASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 AC020765.3-201ENST00000613051 740 ntBASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 AC008267.7-201ENST00000624570 1194 ntBASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 AC073439.1-201ENST00000624121 1774 ntBASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 TCAF2P1-201ENST00000291129 2421 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms