Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RPL8-205ENST00000527914 551 ntTSL 3 BASIC21.79■■□□□ 1.08
PHF8Q9UPP1 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC21.79■■□□□ 1.08
PHF8Q9UPP1 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC21.79■■□□□ 1.08
PHF8Q9UPP1 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC21.79■■□□□ 1.08
PHF8Q9UPP1 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC21.79■■□□□ 1.08
PHF8Q9UPP1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHF8Q9UPP1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.79■■□□□ 1.08
PHF8Q9UPP1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHF8Q9UPP1 HLA-A-202ENST00000376806 1854 ntBASIC21.79■■□□□ 1.08
PHF8Q9UPP1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.79■■□□□ 1.08
PHF8Q9UPP1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PHF8Q9UPP1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHF8Q9UPP1 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC21.79■■□□□ 1.08
PHF8Q9UPP1 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC21.79■■□□□ 1.08
PHF8Q9UPP1 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHF8Q9UPP1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PHF8Q9UPP1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PHF8Q9UPP1 AC005915.1-201ENST00000624912 2018 ntBASIC21.79■■□□□ 1.08
PHF8Q9UPP1 PCDHB18P-201ENST00000524813 2368 ntBASIC21.79■■□□□ 1.08
PHF8Q9UPP1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 AC006033.1-201ENST00000440505 426 ntBASIC21.78■■□□□ 1.08
PHF8Q9UPP1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 FAM86HP-204ENST00000513466 959 ntBASIC21.78■■□□□ 1.08
PHF8Q9UPP1 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHF8Q9UPP1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 AL133373.2-201ENST00000623187 2828 ntBASIC21.77■■□□□ 1.08
PHF8Q9UPP1 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 KRT8P13-201ENST00000463294 1010 ntBASIC21.77■■□□□ 1.08
PHF8Q9UPP1 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 AC000095.1-201ENST00000603208 874 ntBASIC21.77■■□□□ 1.08
PHF8Q9UPP1 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 AL118558.3-201ENST00000607414 1079 ntBASIC21.77■■□□□ 1.08
PHF8Q9UPP1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PHF8Q9UPP1 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC21.77■■□□□ 1.07
PHF8Q9UPP1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
PHF8Q9UPP1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PHF8Q9UPP1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PHF8Q9UPP1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 AGER-203ENST00000375065 665 ntTSL 2 BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 CNN2P8-201ENST00000421872 913 ntBASIC21.76■■□□□ 1.07
PHF8Q9UPP1 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms