Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD1Q9UIS9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 AC124067.4-201ENST00000519691 2379 ntBASIC16.27■□□□□ 0.2
MBD1Q9UIS9 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 SPDYE17-201ENST00000412399 783 ntBASIC16.27■□□□□ 0.2
MBD1Q9UIS9 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 AL589987.1-201ENST00000453380 819 ntBASIC16.27■□□□□ 0.2
MBD1Q9UIS9 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 KRT17P8-201ENST00000540749 863 ntBASIC16.27■□□□□ 0.2
MBD1Q9UIS9 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 AC024267.1-201ENST00000582320 895 ntBASIC16.27■□□□□ 0.2
MBD1Q9UIS9 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.27■□□□□ 0.2
MBD1Q9UIS9 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.27■□□□□ 0.2
MBD1Q9UIS9 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.27■□□□□ 0.2
MBD1Q9UIS9 BCL2-203ENST00000589955 5011 ntBASIC16.27■□□□□ 0.2
MBD1Q9UIS9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.27■□□□□ 0.19
MBD1Q9UIS9 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MBD1Q9UIS9 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
MBD1Q9UIS9 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.27■□□□□ 0.19
MBD1Q9UIS9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MBD1Q9UIS9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.27■□□□□ 0.19
MBD1Q9UIS9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.27■□□□□ 0.19
MBD1Q9UIS9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.27■□□□□ 0.19
MBD1Q9UIS9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
MBD1Q9UIS9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MBD1Q9UIS9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MBD1Q9UIS9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MBD1Q9UIS9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
MBD1Q9UIS9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.27■□□□□ 0.19
MBD1Q9UIS9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 RN7SL837P-201ENST00000463010 287 ntBASIC16.26■□□□□ 0.19
MBD1Q9UIS9 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 AC055876.2-201ENST00000531834 546 ntBASIC16.26■□□□□ 0.19
MBD1Q9UIS9 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 AC023310.3-201ENST00000557027 670 ntBASIC16.26■□□□□ 0.19
MBD1Q9UIS9 AC100756.1-201ENST00000562736 682 ntBASIC16.26■□□□□ 0.19
MBD1Q9UIS9 AC138749.3-201ENST00000567691 622 ntBASIC16.26■□□□□ 0.19
MBD1Q9UIS9 AC116165.1-201ENST00000611806 668 ntBASIC16.26■□□□□ 0.19
MBD1Q9UIS9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD1Q9UIS9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms