Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP25Q9UHP3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP25Q9UHP3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
USP25Q9UHP3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP25Q9UHP3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP25Q9UHP3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP25Q9UHP3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP25Q9UHP3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.68■□□□□ 0.58
USP25Q9UHP3 PRSS29P-201ENST00000440800 595 ntBASIC18.68■□□□□ 0.58
USP25Q9UHP3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.68■□□□□ 0.58
USP25Q9UHP3 AC108073.2-201ENST00000464002 357 ntBASIC18.68■□□□□ 0.58
USP25Q9UHP3 OR7E47P-204ENST00000575924 449 ntBASIC18.68■□□□□ 0.58
USP25Q9UHP3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
USP25Q9UHP3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.68■□□□□ 0.58
USP25Q9UHP3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.68■□□□□ 0.58
USP25Q9UHP3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.68■□□□□ 0.58
USP25Q9UHP3 AP002414.3-201ENST00000589352 1468 ntBASIC18.68■□□□□ 0.58
USP25Q9UHP3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP25Q9UHP3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP25Q9UHP3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP25Q9UHP3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP25Q9UHP3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.68■□□□□ 0.58
USP25Q9UHP3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP25Q9UHP3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
USP25Q9UHP3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.68■□□□□ 0.58
USP25Q9UHP3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP25Q9UHP3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP25Q9UHP3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.67■□□□□ 0.58
USP25Q9UHP3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP25Q9UHP3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP25Q9UHP3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.67■□□□□ 0.58
USP25Q9UHP3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP25Q9UHP3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.67■□□□□ 0.58
USP25Q9UHP3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP25Q9UHP3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
USP25Q9UHP3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.67■□□□□ 0.58
USP25Q9UHP3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP25Q9UHP3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP25Q9UHP3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP25Q9UHP3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP25Q9UHP3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.67■□□□□ 0.58
USP25Q9UHP3 FAM185BP-201ENST00000443595 716 ntBASIC18.67■□□□□ 0.58
USP25Q9UHP3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.67■□□□□ 0.58
USP25Q9UHP3 MIR4515-201ENST00000584082 81 ntBASIC18.67■□□□□ 0.58
USP25Q9UHP3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP25Q9UHP3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP25Q9UHP3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP25Q9UHP3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
USP25Q9UHP3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.67■□□□□ 0.58
USP25Q9UHP3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
USP25Q9UHP3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
USP25Q9UHP3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP25Q9UHP3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC18.67■□□□□ 0.58
USP25Q9UHP3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP25Q9UHP3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP25Q9UHP3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP25Q9UHP3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.67■□□□□ 0.58
USP25Q9UHP3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.67■□□□□ 0.58
USP25Q9UHP3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP25Q9UHP3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.67■□□□□ 0.58
USP25Q9UHP3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.66■□□□□ 0.58
USP25Q9UHP3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP25Q9UHP3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP25Q9UHP3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP25Q9UHP3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP25Q9UHP3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP25Q9UHP3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
USP25Q9UHP3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP25Q9UHP3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP25Q9UHP3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
USP25Q9UHP3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.66■□□□□ 0.58
USP25Q9UHP3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
USP25Q9UHP3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
USP25Q9UHP3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
USP25Q9UHP3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.66■□□□□ 0.58
USP25Q9UHP3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
USP25Q9UHP3 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.66■□□□□ 0.58
USP25Q9UHP3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.66■□□□□ 0.58
USP25Q9UHP3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.66■□□□□ 0.58
USP25Q9UHP3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
USP25Q9UHP3 ACTL9-202ENST00000612068 1252 ntBASIC18.66■□□□□ 0.58
USP25Q9UHP3 AC004790.2-201ENST00000623588 572 ntBASIC18.66■□□□□ 0.58
USP25Q9UHP3 FAM215A-202ENST00000632077 792 ntBASIC18.66■□□□□ 0.58
USP25Q9UHP3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP25Q9UHP3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP25Q9UHP3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP25Q9UHP3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP25Q9UHP3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP25Q9UHP3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP25Q9UHP3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.66■□□□□ 0.58
USP25Q9UHP3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP25Q9UHP3 NORAD-201ENST00000565493 5339 ntBASIC18.66■□□□□ 0.58
USP25Q9UHP3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC18.66■□□□□ 0.58
USP25Q9UHP3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.66■□□□□ 0.58
USP25Q9UHP3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
USP25Q9UHP3 AC023157.3-201ENST00000619086 2088 ntBASIC18.65■□□□□ 0.58
USP25Q9UHP3 AP003680.1-201ENST00000598970 3660 ntBASIC18.65■□□□□ 0.58
USP25Q9UHP3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP25Q9UHP3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP25Q9UHP3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms