Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
COL20A1Q9P218 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
COL20A1Q9P218 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.22■□□□□ 0.51
COL20A1Q9P218 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.22■□□□□ 0.51
COL20A1Q9P218 AC007431.3-201ENST00000623221 587 ntBASIC18.22■□□□□ 0.51
COL20A1Q9P218 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL20A1Q9P218 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.22■□□□□ 0.51
COL20A1Q9P218 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL20A1Q9P218 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL20A1Q9P218 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
COL20A1Q9P218 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL20A1Q9P218 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.22■□□□□ 0.51
COL20A1Q9P218 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
COL20A1Q9P218 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.21■□□□□ 0.51
COL20A1Q9P218 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL20A1Q9P218 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.21■□□□□ 0.51
COL20A1Q9P218 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL20A1Q9P218 AL391825.1-201ENST00000457671 1364 ntBASIC18.21■□□□□ 0.51
COL20A1Q9P218 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL20A1Q9P218 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL20A1Q9P218 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL20A1Q9P218 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.21■□□□□ 0.51
COL20A1Q9P218 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
COL20A1Q9P218 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL20A1Q9P218 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.21■□□□□ 0.51
COL20A1Q9P218 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.21■□□□□ 0.51
COL20A1Q9P218 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.21■□□□□ 0.51
COL20A1Q9P218 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.21■□□□□ 0.51
COL20A1Q9P218 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.21■□□□□ 0.51
COL20A1Q9P218 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.21■□□□□ 0.51
COL20A1Q9P218 CR383656.12-201ENST00000549567 513 ntBASIC18.21■□□□□ 0.51
COL20A1Q9P218 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
COL20A1Q9P218 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
COL20A1Q9P218 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.21■□□□□ 0.51
COL20A1Q9P218 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
COL20A1Q9P218 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.21■□□□□ 0.51
COL20A1Q9P218 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.21■□□□□ 0.51
COL20A1Q9P218 AL358472.5-202ENST00000641448 1267 ntBASIC18.21■□□□□ 0.51
COL20A1Q9P218 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL20A1Q9P218 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
COL20A1Q9P218 PCDH8P1-201ENST00000428983 2773 ntBASIC18.21■□□□□ 0.51
COL20A1Q9P218 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL20A1Q9P218 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
COL20A1Q9P218 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
COL20A1Q9P218 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.2■□□□□ 0.5
COL20A1Q9P218 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
COL20A1Q9P218 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.2■□□□□ 0.5
COL20A1Q9P218 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
COL20A1Q9P218 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.2■□□□□ 0.5
COL20A1Q9P218 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.2■□□□□ 0.5
COL20A1Q9P218 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
COL20A1Q9P218 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
COL20A1Q9P218 HAUS4P1-201ENST00000406739 1145 ntBASIC18.2■□□□□ 0.5
COL20A1Q9P218 TARDBPP1-201ENST00000442013 1203 ntBASIC18.2■□□□□ 0.5
COL20A1Q9P218 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.2■□□□□ 0.5
COL20A1Q9P218 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.2■□□□□ 0.5
COL20A1Q9P218 AC055876.2-201ENST00000531834 546 ntBASIC18.2■□□□□ 0.5
COL20A1Q9P218 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.2■□□□□ 0.5
COL20A1Q9P218 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.2■□□□□ 0.5
COL20A1Q9P218 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.2■□□□□ 0.5
COL20A1Q9P218 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
COL20A1Q9P218 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.2■□□□□ 0.5
COL20A1Q9P218 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
COL20A1Q9P218 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.2■□□□□ 0.5
COL20A1Q9P218 AC138969.3-201ENST00000546612 1459 ntBASIC18.2■□□□□ 0.5
COL20A1Q9P218 AC138932.2-201ENST00000548268 1459 ntBASIC18.2■□□□□ 0.5
COL20A1Q9P218 AC126755.4-201ENST00000549796 1459 ntBASIC18.2■□□□□ 0.5
COL20A1Q9P218 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL20A1Q9P218 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL20A1Q9P218 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL20A1Q9P218 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL20A1Q9P218 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL20A1Q9P218 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.19■□□□□ 0.5
COL20A1Q9P218 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL20A1Q9P218 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
COL20A1Q9P218 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.19■□□□□ 0.5
COL20A1Q9P218 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
COL20A1Q9P218 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms