Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 AC073389.1-201ENST00000595595 795 ntBASIC16.48■□□□□ 0.23
HACD3Q9P035 AC008267.7-201ENST00000624570 1194 ntBASIC16.48■□□□□ 0.23
HACD3Q9P035 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.48■□□□□ 0.23
HACD3Q9P035 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HACD3Q9P035 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.48■□□□□ 0.23
HACD3Q9P035 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
HACD3Q9P035 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HACD3Q9P035 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.47■□□□□ 0.23
HACD3Q9P035 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.47■□□□□ 0.23
HACD3Q9P035 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.47■□□□□ 0.23
HACD3Q9P035 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.47■□□□□ 0.23
HACD3Q9P035 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 AL592424.1-201ENST00000563624 1536 ntBASIC16.47■□□□□ 0.23
HACD3Q9P035 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
HACD3Q9P035 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.47■□□□□ 0.23
HACD3Q9P035 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
HACD3Q9P035 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.47■□□□□ 0.23
HACD3Q9P035 YBX1P5-201ENST00000509441 847 ntBASIC16.47■□□□□ 0.23
HACD3Q9P035 AC105233.2-201ENST00000523697 349 ntBASIC16.47■□□□□ 0.23
HACD3Q9P035 AF228730.5-201ENST00000530288 346 ntBASIC16.47■□□□□ 0.23
HACD3Q9P035 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.47■□□□□ 0.23
HACD3Q9P035 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HACD3Q9P035 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.47■□□□□ 0.23
HACD3Q9P035 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HACD3Q9P035 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HACD3Q9P035 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.47■□□□□ 0.23
HACD3Q9P035 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.47■□□□□ 0.23
HACD3Q9P035 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.47■□□□□ 0.23
HACD3Q9P035 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HACD3Q9P035 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HACD3Q9P035 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HACD3Q9P035 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.46■□□□□ 0.23
HACD3Q9P035 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.46■□□□□ 0.23
HACD3Q9P035 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
HACD3Q9P035 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HACD3Q9P035 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HACD3Q9P035 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HACD3Q9P035 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HACD3Q9P035 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HACD3Q9P035 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HACD3Q9P035 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HACD3Q9P035 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HACD3Q9P035 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HACD3Q9P035 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HACD3Q9P035 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.46■□□□□ 0.23
HACD3Q9P035 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HACD3Q9P035 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HACD3Q9P035 UPF3AP3-201ENST00000420996 769 ntBASIC16.46■□□□□ 0.23
HACD3Q9P035 GPX1P2-201ENST00000429271 606 ntBASIC16.46■□□□□ 0.23
HACD3Q9P035 CEND1P1-201ENST00000451006 455 ntBASIC16.46■□□□□ 0.23
HACD3Q9P035 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.46■□□□□ 0.23
HACD3Q9P035 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.46■□□□□ 0.23
HACD3Q9P035 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.46■□□□□ 0.23
HACD3Q9P035 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.46■□□□□ 0.23
HACD3Q9P035 KRT8P23-201ENST00000560090 1207 ntBASIC16.46■□□□□ 0.23
HACD3Q9P035 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.46■□□□□ 0.23
HACD3Q9P035 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.46■□□□□ 0.23
HACD3Q9P035 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.46■□□□□ 0.23
HACD3Q9P035 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.46■□□□□ 0.23
HACD3Q9P035 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.46■□□□□ 0.23
HACD3Q9P035 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
HACD3Q9P035 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HACD3Q9P035 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HACD3Q9P035 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HACD3Q9P035 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.46■□□□□ 0.23
HACD3Q9P035 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.46■□□□□ 0.23
HACD3Q9P035 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.46■□□□□ 0.23
HACD3Q9P035 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HACD3Q9P035 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HACD3Q9P035 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HACD3Q9P035 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.46■□□□□ 0.23
HACD3Q9P035 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HACD3Q9P035 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HACD3Q9P035 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
HACD3Q9P035 REXO1L8P-201ENST00000604378 1897 ntBASIC16.46■□□□□ 0.22
HACD3Q9P035 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HACD3Q9P035 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 AC006449.6-201ENST00000612330 2296 ntBASIC16.45■□□□□ 0.22
HACD3Q9P035 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.45■□□□□ 0.22
HACD3Q9P035 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms