Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 AC026691.1-201ENST00000602502 2017 ntBASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 AL162727.3-201ENST00000635661 2787 ntBASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 GPS2P2-201ENST00000430745 888 ntBASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 AC025678.2-201ENST00000562061 970 ntBASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 AC004449.1-201ENST00000564240 433 ntBASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 AC024267.1-201ENST00000582320 895 ntBASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.39■□□□□ 0.05
PRDM9Q9NQV7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 FOXO1B-201ENST00000504678 1527 ntBASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 AL139400.1-201ENST00000366220 510 ntBASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 HLA-H-201ENST00000383620 1096 ntBASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 ALG1L8P-201ENST00000533887 760 ntBASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 AP001059.3-201ENST00000619053 235 ntBASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 AC068418.2-201ENST00000577309 3703 ntBASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
PRDM9Q9NQV7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms