Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SP110Q9HB58 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SP110Q9HB58 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SP110Q9HB58 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SP110Q9HB58 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SP110Q9HB58 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.66■□□□□ 0.26
SP110Q9HB58 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.66■□□□□ 0.26
SP110Q9HB58 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SP110Q9HB58 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.66■□□□□ 0.26
SP110Q9HB58 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
SP110Q9HB58 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SP110Q9HB58 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SP110Q9HB58 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SP110Q9HB58 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.66■□□□□ 0.26
SP110Q9HB58 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.66■□□□□ 0.26
SP110Q9HB58 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
SP110Q9HB58 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SP110Q9HB58 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SP110Q9HB58 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SP110Q9HB58 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SP110Q9HB58 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.65■□□□□ 0.26
SP110Q9HB58 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.65■□□□□ 0.26
SP110Q9HB58 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SP110Q9HB58 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SP110Q9HB58 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SP110Q9HB58 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SP110Q9HB58 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
SP110Q9HB58 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SP110Q9HB58 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.65■□□□□ 0.26
SP110Q9HB58 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SP110Q9HB58 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SP110Q9HB58 FAM58DP-201ENST00000428076 619 ntBASIC16.65■□□□□ 0.26
SP110Q9HB58 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.65■□□□□ 0.26
SP110Q9HB58 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.65■□□□□ 0.26
SP110Q9HB58 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.65■□□□□ 0.26
SP110Q9HB58 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.65■□□□□ 0.26
SP110Q9HB58 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.65■□□□□ 0.26
SP110Q9HB58 AC009093.7-201ENST00000623853 1223 ntBASIC16.65■□□□□ 0.26
SP110Q9HB58 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.65■□□□□ 0.26
SP110Q9HB58 AL596087.1-201ENST00000400979 1969 ntBASIC16.65■□□□□ 0.26
SP110Q9HB58 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SP110Q9HB58 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SP110Q9HB58 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SP110Q9HB58 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.65■□□□□ 0.26
SP110Q9HB58 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SP110Q9HB58 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SP110Q9HB58 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.65■□□□□ 0.26
SP110Q9HB58 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.65■□□□□ 0.26
SP110Q9HB58 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SP110Q9HB58 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
SP110Q9HB58 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SP110Q9HB58 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.64■□□□□ 0.25
SP110Q9HB58 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SP110Q9HB58 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
SP110Q9HB58 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SP110Q9HB58 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SP110Q9HB58 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SP110Q9HB58 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SP110Q9HB58 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SP110Q9HB58 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SP110Q9HB58 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SP110Q9HB58 FAM220BP-201ENST00000377689 816 ntBASIC16.64■□□□□ 0.25
SP110Q9HB58 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.64■□□□□ 0.25
SP110Q9HB58 RBPMS2P1-201ENST00000437762 623 ntBASIC16.64■□□□□ 0.25
SP110Q9HB58 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.64■□□□□ 0.25
SP110Q9HB58 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.64■□□□□ 0.25
SP110Q9HB58 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.64■□□□□ 0.25
SP110Q9HB58 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SP110Q9HB58 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.64■□□□□ 0.25
SP110Q9HB58 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.64■□□□□ 0.25
SP110Q9HB58 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.64■□□□□ 0.25
SP110Q9HB58 AC027612.4-201ENST00000605371 583 ntBASIC16.64■□□□□ 0.25
SP110Q9HB58 AC006538.3-201ENST00000612495 578 ntBASIC16.64■□□□□ 0.25
SP110Q9HB58 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SP110Q9HB58 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SP110Q9HB58 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.64■□□□□ 0.25
SP110Q9HB58 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SP110Q9HB58 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SP110Q9HB58 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.64■□□□□ 0.25
SP110Q9HB58 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SP110Q9HB58 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SP110Q9HB58 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SP110Q9HB58 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SP110Q9HB58 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.63■□□□□ 0.25
SP110Q9HB58 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SP110Q9HB58 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SP110Q9HB58 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SP110Q9HB58 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
SP110Q9HB58 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SP110Q9HB58 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.63■□□□□ 0.25
SP110Q9HB58 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SP110Q9HB58 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
SP110Q9HB58 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.63■□□□□ 0.25
SP110Q9HB58 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SP110Q9HB58 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.63■□□□□ 0.25
SP110Q9HB58 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SP110Q9HB58 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SP110Q9HB58 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SP110Q9HB58 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SP110Q9HB58 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms