Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 PCDHA14-201ENST00000506751 2298 ntBASIC17.44■□□□□ 0.38
NXF3Q9H4D5 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 AL589987.1-201ENST00000453380 819 ntBASIC17.44■□□□□ 0.38
NXF3Q9H4D5 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 AC025048.3-201ENST00000590609 569 ntBASIC17.44■□□□□ 0.38
NXF3Q9H4D5 AC005702.4-201ENST00000618393 416 ntBASIC17.44■□□□□ 0.38
NXF3Q9H4D5 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 AC092364.2-201ENST00000596710 2692 ntBASIC17.44■□□□□ 0.38
NXF3Q9H4D5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NXF3Q9H4D5 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 AC004987.2-201ENST00000395959 1148 ntBASIC17.43■□□□□ 0.38
NXF3Q9H4D5 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 AC243562.2-201ENST00000561247 970 ntBASIC17.43■□□□□ 0.38
NXF3Q9H4D5 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms