Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 SPDYE15P-201ENST00000424157 909 ntBASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 REXO1L2P-201ENST00000425429 2069 ntBASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 LINC00982-205ENST00000420957 435 ntBASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 AC092597.1-201ENST00000487352 616 ntBASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 KRT18P6-201ENST00000555540 1265 ntBASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 HSPA7-201ENST00000445535 1927 ntBASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.3□□□□□ -0.12
SLIRPQ9GZT3 AC131009.4-201ENST00000624048 1740 ntBASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 BX640514.1-201ENST00000583223 1918 ntBASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms