Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 PCDHB19P-201ENST00000570871 2371 ntBASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SPDYE19P-201ENST00000338590 713 ntBASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 COPE-202ENST00000349893 948 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 RN7SL692P-201ENST00000464677 288 ntBASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 HLA-J-202ENST00000469281 1241 ntBASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 HLA-V-204ENST00000476601 1289 ntBASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 API5-211ENST00000534695 560 ntTSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms