Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 AC006277.1-201ENST00000624348 1610 ntBASIC12.37□□□□□ -0.43
SSBP4Q9BWG4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP4Q9BWG4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.37□□□□□ -0.43
SSBP4Q9BWG4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP4Q9BWG4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 IGHV3-41-201ENST00000613121 348 ntBASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 AC097637.2-201ENST00000624096 1997 ntBASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP4Q9BWG4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 NUS1P1-201ENST00000446295 882 ntBASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 SIGLEC30P-201ENST00000455569 941 ntBASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 AC083849.1-201ENST00000615227 514 ntBASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 AC005363.2-201ENST00000618631 242 ntBASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 AC138969.2-201ENST00000532739 9932 ntBASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP4Q9BWG4 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms