Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.22
PCGF1Q9BSM1 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PCGF1Q9BSM1 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.22
PCGF1Q9BSM1 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
PCGF1Q9BSM1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
PCGF1Q9BSM1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 AC022188.1-201ENST00000620960 1664 ntBASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 PMS2P4-201ENST00000412466 1052 ntBASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 TSEN15P1-201ENST00000423257 515 ntBASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 ADH5P3-201ENST00000433842 1137 ntBASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 AL592309.1-201ENST00000443127 649 ntBASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 IGHV3-62-201ENST00000520057 340 ntBASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 AC109635.5-201ENST00000533593 962 ntBASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.7□□□□□ -0.22
PCGF1Q9BSM1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 AKAP8P1-201ENST00000434743 1349 ntBASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 AL645728.1-201ENST00000366221 2101 ntBASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 AC006277.1-201ENST00000624348 1610 ntBASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 AC092474.2-201ENST00000424288 719 ntBASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 AC079140.1-201ENST00000508039 487 ntBASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 AC027796.2-201ENST00000575326 344 ntBASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 WASH6P-202ENST00000359512 1437 ntBASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms