Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 AC104581.4-201ENST00000623126 3052 ntBASIC16.37■□□□□ 0.21
NDNQ99608 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDNQ99608 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.36■□□□□ 0.21
NDNQ99608 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDNQ99608 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDNQ99608 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDNQ99608 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDNQ99608 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NDNQ99608 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NDNQ99608 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDNQ99608 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NDNQ99608 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.36■□□□□ 0.21
NDNQ99608 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDNQ99608 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.36■□□□□ 0.21
NDNQ99608 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.36■□□□□ 0.21
NDNQ99608 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.36■□□□□ 0.21
NDNQ99608 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
NDNQ99608 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
NDNQ99608 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
NDNQ99608 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
NDNQ99608 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.36■□□□□ 0.21
NDNQ99608 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDNQ99608 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.36■□□□□ 0.21
NDNQ99608 AC007967.2-201ENST00000432613 625 ntBASIC16.36■□□□□ 0.21
NDNQ99608 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDNQ99608 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.36■□□□□ 0.21
NDNQ99608 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.36■□□□□ 0.21
NDNQ99608 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.36■□□□□ 0.21
NDNQ99608 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDNQ99608 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDNQ99608 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDNQ99608 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.36■□□□□ 0.21
NDNQ99608 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDNQ99608 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDNQ99608 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.36■□□□□ 0.21
NDNQ99608 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
NDNQ99608 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDNQ99608 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NDNQ99608 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDNQ99608 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
NDNQ99608 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
NDNQ99608 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDNQ99608 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDNQ99608 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
NDNQ99608 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NDNQ99608 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NDNQ99608 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.35■□□□□ 0.21
NDNQ99608 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.35■□□□□ 0.21
NDNQ99608 AC034105.1-201ENST00000563488 319 ntBASIC16.35■□□□□ 0.21
NDNQ99608 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.35■□□□□ 0.21
NDNQ99608 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.35■□□□□ 0.21
NDNQ99608 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.35■□□□□ 0.21
NDNQ99608 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.35■□□□□ 0.21
NDNQ99608 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
NDNQ99608 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.35■□□□□ 0.21
NDNQ99608 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.35■□□□□ 0.21
NDNQ99608 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NDNQ99608 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NDNQ99608 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NDNQ99608 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDNQ99608 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDNQ99608 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDNQ99608 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDNQ99608 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.34■□□□□ 0.21
NDNQ99608 CICP13-201ENST00000422015 2789 ntBASIC16.34■□□□□ 0.21
NDNQ99608 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDNQ99608 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDNQ99608 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NDNQ99608 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.34■□□□□ 0.21
NDNQ99608 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.34■□□□□ 0.21
NDNQ99608 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms