Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TRGV9Q99603 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
TRGV9Q99603 METTL26-205ENST00000397666 726 ntTSL 2 BASIC12.7□□□□□ -0.38
TRGV9Q99603 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TRGV9Q99603 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TRGV9Q99603 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.7□□□□□ -0.38
TRGV9Q99603 AL513480.1-201ENST00000451731 511 ntBASIC12.7□□□□□ -0.38
TRGV9Q99603 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.7□□□□□ -0.38
TRGV9Q99603 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV9Q99603 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
TRGV9Q99603 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.7□□□□□ -0.38
TRGV9Q99603 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.7□□□□□ -0.38
TRGV9Q99603 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV9Q99603 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV9Q99603 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV9Q99603 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV9Q99603 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV9Q99603 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV9Q99603 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV9Q99603 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.7□□□□□ -0.38
TRGV9Q99603 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV9Q99603 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV9Q99603 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.7□□□□□ -0.38
TRGV9Q99603 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
TRGV9Q99603 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.7□□□□□ -0.38
TRGV9Q99603 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
TRGV9Q99603 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV9Q99603 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.7□□□□□ -0.38
TRGV9Q99603 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
TRGV9Q99603 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV9Q99603 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.7□□□□□ -0.38
TRGV9Q99603 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRGV9Q99603 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.69□□□□□ -0.38
TRGV9Q99603 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.69□□□□□ -0.38
TRGV9Q99603 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.69□□□□□ -0.38
TRGV9Q99603 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.69□□□□□ -0.38
TRGV9Q99603 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRGV9Q99603 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
TRGV9Q99603 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.69□□□□□ -0.38
TRGV9Q99603 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.69□□□□□ -0.38
TRGV9Q99603 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRGV9Q99603 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 AC011477.6-201ENST00000604980 1927 ntBASIC12.69□□□□□ -0.38
TRGV9Q99603 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.69□□□□□ -0.38
TRGV9Q99603 KRT18P67-201ENST00000432816 1264 ntBASIC12.69□□□□□ -0.38
TRGV9Q99603 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRGV9Q99603 FAM197Y8-203ENST00000450145 560 ntBASIC12.69□□□□□ -0.38
TRGV9Q99603 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.69□□□□□ -0.38
TRGV9Q99603 KRT18P34-201ENST00000488218 1270 ntBASIC12.69□□□□□ -0.38
TRGV9Q99603 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.69□□□□□ -0.38
TRGV9Q99603 AC012640.2-201ENST00000561606 901 ntBASIC12.69□□□□□ -0.38
TRGV9Q99603 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.69□□□□□ -0.38
TRGV9Q99603 MIR4751-201ENST00000578027 74 ntBASIC12.69□□□□□ -0.38
TRGV9Q99603 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.69□□□□□ -0.38
TRGV9Q99603 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
TRGV9Q99603 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TRGV9Q99603 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.69□□□□□ -0.38
TRGV9Q99603 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TRGV9Q99603 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 AC006058.4-201ENST00000624016 1670 ntBASIC12.69□□□□□ -0.38
TRGV9Q99603 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRGV9Q99603 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.69□□□□□ -0.38
TRGV9Q99603 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.69□□□□□ -0.38
TRGV9Q99603 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.69□□□□□ -0.38
TRGV9Q99603 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.69□□□□□ -0.38
TRGV9Q99603 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.69□□□□□ -0.38
TRGV9Q99603 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.69□□□□□ -0.38
TRGV9Q99603 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRGV9Q99603 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
TRGV9Q99603 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRGV9Q99603 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV9Q99603 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
TRGV9Q99603 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
TRGV9Q99603 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.68□□□□□ -0.38
TRGV9Q99603 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.68□□□□□ -0.38
TRGV9Q99603 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV9Q99603 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms