Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC084121.4-201ENST00000641598 221 ntBASIC15.84■□□□□ 0.13
PKP4Q99569 AF228730.8-201ENST00000642140 221 ntBASIC15.84■□□□□ 0.13
PKP4Q99569 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PKP4Q99569 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PKP4Q99569 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PKP4Q99569 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.84■□□□□ 0.13
PKP4Q99569 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PKP4Q99569 PCDHA1-201ENST00000378133 2726 ntBASIC15.84■□□□□ 0.13
PKP4Q99569 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.84■□□□□ 0.13
PKP4Q99569 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.84■□□□□ 0.13
PKP4Q99569 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.84■□□□□ 0.13
PKP4Q99569 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PKP4Q99569 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PKP4Q99569 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PKP4Q99569 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
PKP4Q99569 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
PKP4Q99569 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PKP4Q99569 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PKP4Q99569 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
PKP4Q99569 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PKP4Q99569 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PKP4Q99569 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.83■□□□□ 0.12
PKP4Q99569 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PKP4Q99569 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PKP4Q99569 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PKP4Q99569 AL627223.1-201ENST00000416693 442 ntBASIC15.83■□□□□ 0.12
PKP4Q99569 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PKP4Q99569 FAM58DP-201ENST00000428076 619 ntBASIC15.83■□□□□ 0.12
PKP4Q99569 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PKP4Q99569 AC004967.1-201ENST00000453589 447 ntBASIC15.83■□□□□ 0.12
PKP4Q99569 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PKP4Q99569 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.83■□□□□ 0.12
PKP4Q99569 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.83■□□□□ 0.12
PKP4Q99569 AC004835.2-201ENST00000603762 682 ntBASIC15.83■□□□□ 0.12
PKP4Q99569 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PKP4Q99569 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PKP4Q99569 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.83■□□□□ 0.12
PKP4Q99569 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
PKP4Q99569 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.83■□□□□ 0.12
PKP4Q99569 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PKP4Q99569 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.83■□□□□ 0.12
PKP4Q99569 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PKP4Q99569 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PKP4Q99569 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.83■□□□□ 0.12
PKP4Q99569 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.83■□□□□ 0.12
PKP4Q99569 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PKP4Q99569 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PKP4Q99569 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
PKP4Q99569 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PKP4Q99569 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PKP4Q99569 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PKP4Q99569 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PKP4Q99569 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
PKP4Q99569 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKP4Q99569 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKP4Q99569 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PKP4Q99569 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.82■□□□□ 0.12
PKP4Q99569 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.82■□□□□ 0.12
PKP4Q99569 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKP4Q99569 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKP4Q99569 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PKP4Q99569 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.82■□□□□ 0.12
PKP4Q99569 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.82■□□□□ 0.12
PKP4Q99569 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PKP4Q99569 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKP4Q99569 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.82■□□□□ 0.12
PKP4Q99569 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKP4Q99569 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.82■□□□□ 0.12
PKP4Q99569 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PKP4Q99569 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKP4Q99569 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.82■□□□□ 0.12
PKP4Q99569 AC254562.1-201ENST00000417586 456 ntBASIC15.82■□□□□ 0.12
PKP4Q99569 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.82■□□□□ 0.12
PKP4Q99569 AP006288.1-201ENST00000446065 395 ntBASIC15.82■□□□□ 0.12
PKP4Q99569 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PKP4Q99569 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKP4Q99569 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.82■□□□□ 0.12
PKP4Q99569 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PKP4Q99569 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
PKP4Q99569 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.82■□□□□ 0.12
PKP4Q99569 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.82■□□□□ 0.12
PKP4Q99569 MIR4321-201ENST00000592276 80 ntBASIC15.82■□□□□ 0.12
PKP4Q99569 AL596442.2-201ENST00000610240 980 ntBASIC15.82■□□□□ 0.12
PKP4Q99569 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PKP4Q99569 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PKP4Q99569 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKP4Q99569 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PKP4Q99569 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PKP4Q99569 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.82■□□□□ 0.12
PKP4Q99569 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKP4Q99569 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.82■□□□□ 0.12
PKP4Q99569 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
PKP4Q99569 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKP4Q99569 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
PKP4Q99569 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PKP4Q99569 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKP4Q99569 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKP4Q99569 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PKP4Q99569 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKP4Q99569 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms