Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 AC073648.2-201ENST00000510116 352 ntBASIC13.03□□□□□ -0.32
RNF2Q99496 AC139887.3-201ENST00000568585 713 ntBASIC13.03□□□□□ -0.32
RNF2Q99496 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.03□□□□□ -0.32
RNF2Q99496 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.03□□□□□ -0.32
RNF2Q99496 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.03□□□□□ -0.32
RNF2Q99496 AC025062.2-201ENST00000605477 670 ntBASIC13.03□□□□□ -0.32
RNF2Q99496 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RNF2Q99496 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
RNF2Q99496 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF2Q99496 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.03□□□□□ -0.32
RNF2Q99496 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.03□□□□□ -0.32
RNF2Q99496 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RNF2Q99496 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
RNF2Q99496 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RNF2Q99496 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF2Q99496 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RNF2Q99496 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF2Q99496 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.03□□□□□ -0.32
RNF2Q99496 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.03□□□□□ -0.32
RNF2Q99496 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF2Q99496 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF2Q99496 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.03□□□□□ -0.32
RNF2Q99496 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RNF2Q99496 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF2Q99496 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.03□□□□□ -0.32
RNF2Q99496 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RNF2Q99496 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF2Q99496 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF2Q99496 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.03□□□□□ -0.32
RNF2Q99496 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF2Q99496 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
RNF2Q99496 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
RNF2Q99496 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RNF2Q99496 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RNF2Q99496 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.02□□□□□ -0.32
RNF2Q99496 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RNF2Q99496 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RNF2Q99496 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.02□□□□□ -0.32
RNF2Q99496 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.02□□□□□ -0.32
RNF2Q99496 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
RNF2Q99496 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
RNF2Q99496 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
RNF2Q99496 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
RNF2Q99496 MYO15B-237ENST00000642007 4893 ntBASIC13.02□□□□□ -0.32
RNF2Q99496 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
RNF2Q99496 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RNF2Q99496 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RNF2Q99496 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.02□□□□□ -0.33
RNF2Q99496 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RNF2Q99496 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RNF2Q99496 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.02□□□□□ -0.33
RNF2Q99496 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RNF2Q99496 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.02□□□□□ -0.33
RNF2Q99496 AC079781.3-201ENST00000449110 356 ntBASIC13.02□□□□□ -0.33
RNF2Q99496 FAM197Y8-203ENST00000450145 560 ntBASIC13.02□□□□□ -0.33
RNF2Q99496 RNPS1P1-201ENST00000507437 918 ntBASIC13.02□□□□□ -0.33
RNF2Q99496 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.02□□□□□ -0.33
RNF2Q99496 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.02□□□□□ -0.33
RNF2Q99496 TERC-201ENST00000602385 541 ntBASIC13.02□□□□□ -0.33
RNF2Q99496 AL353135.1-201ENST00000606729 504 ntBASIC13.02□□□□□ -0.33
RNF2Q99496 TP73-AS1-207ENST00000624167 988 ntBASIC13.02□□□□□ -0.33
RNF2Q99496 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RNF2Q99496 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.02□□□□□ -0.33
RNF2Q99496 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.02□□□□□ -0.33
RNF2Q99496 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
RNF2Q99496 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.02□□□□□ -0.33
RNF2Q99496 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.02□□□□□ -0.33
RNF2Q99496 TOP3BP1-201ENST00000420768 1380 ntBASIC13.02□□□□□ -0.33
RNF2Q99496 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RNF2Q99496 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.02□□□□□ -0.33
RNF2Q99496 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RNF2Q99496 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RNF2Q99496 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.02□□□□□ -0.33
RNF2Q99496 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RNF2Q99496 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RNF2Q99496 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
RNF2Q99496 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RNF2Q99496 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.02□□□□□ -0.33
RNF2Q99496 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.02□□□□□ -0.33
RNF2Q99496 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.02□□□□□ -0.33
RNF2Q99496 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.02□□□□□ -0.33
RNF2Q99496 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.02□□□□□ -0.33
RNF2Q99496 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RNF2Q99496 LINC01144-201ENST00000626198 1710 ntBASIC13.02□□□□□ -0.33
RNF2Q99496 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.02□□□□□ -0.33
RNF2Q99496 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
RNF2Q99496 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RNF2Q99496 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RNF2Q99496 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RNF2Q99496 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RNF2Q99496 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RNF2Q99496 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RNF2Q99496 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RNF2Q99496 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RNF2Q99496 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.01□□□□□ -0.33
RNF2Q99496 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RNF2Q99496 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RNF2Q99496 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RNF2Q99496 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RNF2Q99496 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms