Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MUC4Q99102 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MUC4Q99102 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MUC4Q99102 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MUC4Q99102 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MUC4Q99102 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MUC4Q99102 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
MUC4Q99102 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC11.91□□□□□ -0.5
MUC4Q99102 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.91□□□□□ -0.5
MUC4Q99102 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
MUC4Q99102 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MUC4Q99102 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC11.91□□□□□ -0.5
MUC4Q99102 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
MUC4Q99102 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
MUC4Q99102 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
MUC4Q99102 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MUC4Q99102 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MUC4Q99102 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC11.91□□□□□ -0.5
MUC4Q99102 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
MUC4Q99102 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
MUC4Q99102 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MUC4Q99102 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
MUC4Q99102 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
MUC4Q99102 RNU1-129P-201ENST00000384064 167 ntBASIC11.91□□□□□ -0.5
MUC4Q99102 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC11.91□□□□□ -0.5
MUC4Q99102 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MUC4Q99102 AL591424.1-201ENST00000442569 1213 ntBASIC11.91□□□□□ -0.5
MUC4Q99102 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC11.91□□□□□ -0.5
MUC4Q99102 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC11.91□□□□□ -0.5
MUC4Q99102 MIR3687-2-201ENST00000577708 61 ntBASIC11.91□□□□□ -0.5
MUC4Q99102 U1.21-201ENST00000580816 167 ntBASIC11.91□□□□□ -0.5
MUC4Q99102 MIR3687-1-201ENST00000614492 61 ntBASIC11.91□□□□□ -0.5
MUC4Q99102 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC11.91□□□□□ -0.5
MUC4Q99102 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MUC4Q99102 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MUC4Q99102 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MUC4Q99102 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.9□□□□□ -0.5
MUC4Q99102 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.9□□□□□ -0.5
MUC4Q99102 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC11.9□□□□□ -0.5
MUC4Q99102 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC11.9□□□□□ -0.5
MUC4Q99102 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
MUC4Q99102 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
MUC4Q99102 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.9□□□□□ -0.5
MUC4Q99102 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
MUC4Q99102 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC11.9□□□□□ -0.5
MUC4Q99102 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.9□□□□□ -0.5
MUC4Q99102 MED15P5-201ENST00000423150 992 ntBASIC11.9□□□□□ -0.5
MUC4Q99102 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.9□□□□□ -0.5
MUC4Q99102 RFPL4AP1-201ENST00000530883 850 ntBASIC11.9□□□□□ -0.5
MUC4Q99102 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.9□□□□□ -0.5
MUC4Q99102 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.9□□□□□ -0.5
MUC4Q99102 MIR3909-201ENST00000579518 119 ntBASIC11.9□□□□□ -0.5
MUC4Q99102 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC11.9□□□□□ -0.5
MUC4Q99102 AC020765.3-201ENST00000613051 740 ntBASIC11.9□□□□□ -0.5
MUC4Q99102 AC116407.3-201ENST00000623905 1129 ntBASIC11.9□□□□□ -0.5
MUC4Q99102 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC11.9□□□□□ -0.5
MUC4Q99102 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
MUC4Q99102 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.9□□□□□ -0.5
MUC4Q99102 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
MUC4Q99102 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC11.9□□□□□ -0.5
MUC4Q99102 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
MUC4Q99102 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
MUC4Q99102 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
MUC4Q99102 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
MUC4Q99102 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
MUC4Q99102 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.89□□□□□ -0.51
MUC4Q99102 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
MUC4Q99102 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.89□□□□□ -0.51
MUC4Q99102 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 COA5-202ENST00000409997 557 ntTSL 4 BASIC11.89□□□□□ -0.51
MUC4Q99102 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.89□□□□□ -0.51
MUC4Q99102 AC034105.1-201ENST00000563488 319 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms