Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.23□□□□□ -0.29
ZNF48Q96MX3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.23□□□□□ -0.29
ZNF48Q96MX3 AC105021.1-202ENST00000570572 669 ntBASIC13.23□□□□□ -0.29
ZNF48Q96MX3 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.23□□□□□ -0.29
ZNF48Q96MX3 AL589739.1-201ENST00000607720 493 ntBASIC13.23□□□□□ -0.29
ZNF48Q96MX3 AC004233.3-201ENST00000607794 1269 ntBASIC13.23□□□□□ -0.29
ZNF48Q96MX3 AL844908.2-201ENST00000609461 460 ntBASIC13.23□□□□□ -0.29
ZNF48Q96MX3 AC008738.7-201ENST00000609744 511 ntBASIC13.23□□□□□ -0.29
ZNF48Q96MX3 AC025048.6-201ENST00000634326 1161 ntBASIC13.23□□□□□ -0.29
ZNF48Q96MX3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.23□□□□□ -0.29
ZNF48Q96MX3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
ZNF48Q96MX3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.23□□□□□ -0.29
ZNF48Q96MX3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
ZNF48Q96MX3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZNF48Q96MX3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZNF48Q96MX3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.23□□□□□ -0.29
ZNF48Q96MX3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZNF48Q96MX3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZNF48Q96MX3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZNF48Q96MX3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.23□□□□□ -0.29
ZNF48Q96MX3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZNF48Q96MX3 HLA-A-202ENST00000376806 1854 ntBASIC13.23□□□□□ -0.29
ZNF48Q96MX3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ZNF48Q96MX3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZNF48Q96MX3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZNF48Q96MX3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
ZNF48Q96MX3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 CETN4P-206ENST00000642099 2168 ntBASIC13.22□□□□□ -0.29
ZNF48Q96MX3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 CICP6-201ENST00000457191 2729 ntBASIC13.22□□□□□ -0.29
ZNF48Q96MX3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 AC009407.1-201ENST00000568958 598 ntBASIC13.22□□□□□ -0.29
ZNF48Q96MX3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 AL391256.1-201ENST00000443260 1855 ntBASIC13.22□□□□□ -0.29
ZNF48Q96MX3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 AL645728.1-201ENST00000366221 2101 ntBASIC13.22□□□□□ -0.29
ZNF48Q96MX3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.22□□□□□ -0.29
ZNF48Q96MX3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 AC087499.5-201ENST00000452760 1342 ntBASIC13.21□□□□□ -0.29
ZNF48Q96MX3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms