Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00477Q96M19 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.23□□□□□ -0.45
LINC00477Q96M19 HMGA1P7-201ENST00000406908 502 ntBASIC12.23□□□□□ -0.45
LINC00477Q96M19 KRT18P67-201ENST00000432816 1264 ntBASIC12.23□□□□□ -0.45
LINC00477Q96M19 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.23□□□□□ -0.45
LINC00477Q96M19 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
LINC00477Q96M19 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LINC00477Q96M19 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
LINC00477Q96M19 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC00477Q96M19 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00477Q96M19 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.23□□□□□ -0.45
LINC00477Q96M19 AL121912.1-201ENST00000603683 238 ntBASIC12.23□□□□□ -0.45
LINC00477Q96M19 ACTL9-202ENST00000612068 1252 ntBASIC12.23□□□□□ -0.45
LINC00477Q96M19 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
LINC00477Q96M19 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
LINC00477Q96M19 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00477Q96M19 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
LINC00477Q96M19 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC00477Q96M19 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00477Q96M19 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00477Q96M19 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.23□□□□□ -0.45
LINC00477Q96M19 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00477Q96M19 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00477Q96M19 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00477Q96M19 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 AP002414.2-201ENST00000591780 3365 ntBASIC12.22□□□□□ -0.45
LINC00477Q96M19 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 AP002414.3-201ENST00000589352 1468 ntBASIC12.22□□□□□ -0.45
LINC00477Q96M19 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 AL513480.1-201ENST00000451731 511 ntBASIC12.22□□□□□ -0.45
LINC00477Q96M19 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 AC018712.1-201ENST00000455767 687 ntBASIC12.22□□□□□ -0.45
LINC00477Q96M19 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 OR7E47P-204ENST00000575924 449 ntBASIC12.22□□□□□ -0.45
LINC00477Q96M19 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC00477Q96M19 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00477Q96M19 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC00477Q96M19 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00477Q96M19 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.21□□□□□ -0.45
LINC00477Q96M19 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
LINC00477Q96M19 C8orf49-201ENST00000525043 1968 ntBASIC12.21□□□□□ -0.45
LINC00477Q96M19 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00477Q96M19 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
LINC00477Q96M19 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.21□□□□□ -0.45
LINC00477Q96M19 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
LINC00477Q96M19 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00477Q96M19 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
LINC00477Q96M19 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC00477Q96M19 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC00477Q96M19 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms