Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DDX1Q92499 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.27■□□□□ 0.35
DDX1Q92499 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
DDX1Q92499 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
DDX1Q92499 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DDX1Q92499 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.27■□□□□ 0.35
DDX1Q92499 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
DDX1Q92499 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.27■□□□□ 0.35
DDX1Q92499 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
DDX1Q92499 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
DDX1Q92499 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.27■□□□□ 0.35
DDX1Q92499 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.27■□□□□ 0.35
DDX1Q92499 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.26■□□□□ 0.35
DDX1Q92499 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.26■□□□□ 0.35
DDX1Q92499 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
DDX1Q92499 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
DDX1Q92499 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
DDX1Q92499 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.26■□□□□ 0.35
DDX1Q92499 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.26■□□□□ 0.35
DDX1Q92499 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.26■□□□□ 0.35
DDX1Q92499 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.26■□□□□ 0.35
DDX1Q92499 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
DDX1Q92499 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.26■□□□□ 0.35
DDX1Q92499 AP000842.3-202ENST00000569238 1080 ntBASIC17.26■□□□□ 0.35
DDX1Q92499 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.26■□□□□ 0.35
DDX1Q92499 AC084121.4-201ENST00000641598 221 ntBASIC17.26■□□□□ 0.35
DDX1Q92499 AF228730.8-201ENST00000642140 221 ntBASIC17.26■□□□□ 0.35
DDX1Q92499 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.26■□□□□ 0.35
DDX1Q92499 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
DDX1Q92499 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
DDX1Q92499 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX1Q92499 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.26■□□□□ 0.35
DDX1Q92499 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
DDX1Q92499 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX1Q92499 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DDX1Q92499 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DDX1Q92499 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX1Q92499 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.25■□□□□ 0.35
DDX1Q92499 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.25■□□□□ 0.35
DDX1Q92499 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
DDX1Q92499 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX1Q92499 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX1Q92499 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
DDX1Q92499 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX1Q92499 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.25■□□□□ 0.35
DDX1Q92499 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
DDX1Q92499 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX1Q92499 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX1Q92499 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX1Q92499 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DDX1Q92499 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
DDX1Q92499 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.25■□□□□ 0.35
DDX1Q92499 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.25■□□□□ 0.35
DDX1Q92499 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.25■□□□□ 0.35
DDX1Q92499 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
DDX1Q92499 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
DDX1Q92499 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.25■□□□□ 0.35
DDX1Q92499 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.25■□□□□ 0.35
DDX1Q92499 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.25■□□□□ 0.35
DDX1Q92499 AC015911.4-201ENST00000588022 1070 ntBASIC17.25■□□□□ 0.35
DDX1Q92499 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
DDX1Q92499 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.25■□□□□ 0.35
DDX1Q92499 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DDX1Q92499 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX1Q92499 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX1Q92499 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
DDX1Q92499 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX1Q92499 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
DDX1Q92499 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
DDX1Q92499 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX1Q92499 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
DDX1Q92499 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX1Q92499 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.25■□□□□ 0.35
DDX1Q92499 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX1Q92499 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.24■□□□□ 0.35
DDX1Q92499 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.24■□□□□ 0.35
DDX1Q92499 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.24■□□□□ 0.35
DDX1Q92499 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
DDX1Q92499 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX1Q92499 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX1Q92499 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms