Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CCNB3Q8WWL7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
CCNB3Q8WWL7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC24.72■■□□□ 1.55
CCNB3Q8WWL7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
CCNB3Q8WWL7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CCNB3Q8WWL7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC24.72■■□□□ 1.55
CCNB3Q8WWL7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC24.72■■□□□ 1.55
CCNB3Q8WWL7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC24.72■■□□□ 1.55
CCNB3Q8WWL7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC24.72■■□□□ 1.55
CCNB3Q8WWL7 RARRES2P5-201ENST00000564013 466 ntBASIC24.72■■□□□ 1.55
CCNB3Q8WWL7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC24.72■■□□□ 1.55
CCNB3Q8WWL7 LINC01115-203ENST00000606068 577 ntBASIC24.72■■□□□ 1.55
CCNB3Q8WWL7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CCNB3Q8WWL7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CCNB3Q8WWL7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC24.72■■□□□ 1.55
CCNB3Q8WWL7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC24.72■■□□□ 1.55
CCNB3Q8WWL7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
CCNB3Q8WWL7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CCNB3Q8WWL7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CCNB3Q8WWL7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 MIR8072-201ENST00000614241 80 ntBASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 AC092364.2-201ENST00000596710 2692 ntBASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CCNB3Q8WWL7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
CCNB3Q8WWL7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
CCNB3Q8WWL7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
CCNB3Q8WWL7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC24.7■■□□□ 1.55
CCNB3Q8WWL7 MIR658-201ENST00000385210 100 ntBASIC24.7■■□□□ 1.55
CCNB3Q8WWL7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
CCNB3Q8WWL7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC24.7■■□□□ 1.55
CCNB3Q8WWL7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC24.7■■□□□ 1.55
CCNB3Q8WWL7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC24.7■■□□□ 1.55
CCNB3Q8WWL7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC24.7■■□□□ 1.55
CCNB3Q8WWL7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC24.7■■□□□ 1.55
CCNB3Q8WWL7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
CCNB3Q8WWL7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC24.7■■□□□ 1.55
CCNB3Q8WWL7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
CCNB3Q8WWL7 RPSAP52-203ENST00000622976 1023 ntBASIC24.7■■□□□ 1.55
CCNB3Q8WWL7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC24.7■■□□□ 1.54
CCNB3Q8WWL7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC24.7■■□□□ 1.54
CCNB3Q8WWL7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC24.7■■□□□ 1.54
CCNB3Q8WWL7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CCNB3Q8WWL7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CCNB3Q8WWL7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC24.7■■□□□ 1.54
CCNB3Q8WWL7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CCNB3Q8WWL7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CCNB3Q8WWL7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC24.69■■□□□ 1.54
CCNB3Q8WWL7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
CCNB3Q8WWL7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
CCNB3Q8WWL7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CCNB3Q8WWL7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CCNB3Q8WWL7 AZGP1P1-201ENST00000411909 902 ntBASIC24.69■■□□□ 1.54
CCNB3Q8WWL7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
CCNB3Q8WWL7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC24.69■■□□□ 1.54
CCNB3Q8WWL7 AC022210.1-201ENST00000449856 793 ntBASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms