Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 PAWRP1-201ENST00000451083 565 ntBASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 AC010331.1-201ENST00000611423 582 ntBASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.93□□□□□ -0.18
SMIM4Q8WVI0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 AGAP7P-201ENST00000582299 2062 ntBASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 AGAP14-201ENST00000624701 2060 ntBASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 AC005912.2-201ENST00000619492 2400 ntBASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 AC011477.6-201ENST00000604980 1927 ntBASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 AL645929.1-201ENST00000420084 975 ntBASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 PMS2P1-201ENST00000431037 1228 ntBASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 MROH4P-201ENST00000431302 1578 ntBASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM4Q8WVI0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms