Protein–RNA interactions for Protein: Q8TF40

FNIP1, Folliculin-interacting protein 1, humanhuman

Predictions only

Length 1,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNIP1Q8TF40 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FNIP1Q8TF40 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FNIP1Q8TF40 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FNIP1Q8TF40 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FNIP1Q8TF40 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FNIP1Q8TF40 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FNIP1Q8TF40 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 IGHV3-62-201ENST00000520057 340 ntBASIC16.92■□□□□ 0.3
FNIP1Q8TF40 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
FNIP1Q8TF40 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 TIMM8BP1-201ENST00000452384 211 ntBASIC16.91■□□□□ 0.3
FNIP1Q8TF40 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 AC069335.1-201ENST00000489972 472 ntBASIC16.91■□□□□ 0.3
FNIP1Q8TF40 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 AC092865.5-201ENST00000545435 363 ntBASIC16.91■□□□□ 0.3
FNIP1Q8TF40 AC005829.1-201ENST00000570002 483 ntBASIC16.91■□□□□ 0.3
FNIP1Q8TF40 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.91■□□□□ 0.3
FNIP1Q8TF40 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.91■□□□□ 0.3
FNIP1Q8TF40 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.91■□□□□ 0.3
FNIP1Q8TF40 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.9■□□□□ 0.3
FNIP1Q8TF40 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNIP1Q8TF40 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNIP1Q8TF40 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
FNIP1Q8TF40 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNIP1Q8TF40 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNIP1Q8TF40 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
FNIP1Q8TF40 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNIP1Q8TF40 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.9■□□□□ 0.3
FNIP1Q8TF40 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.9■□□□□ 0.3
FNIP1Q8TF40 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNIP1Q8TF40 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNIP1Q8TF40 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FNIP1Q8TF40 AL691432.1-201ENST00000596308 1422 ntBASIC16.9■□□□□ 0.3
FNIP1Q8TF40 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNIP1Q8TF40 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNIP1Q8TF40 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms