Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 AC010507.1-201ENST00000633895 436 ntBASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLHC1Q8NHS4 AC103702.1-201ENST00000548801 2630 ntBASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 CRYGEP-201ENST00000412192 528 ntBASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 RNA5SP419-201ENST00000515908 135 ntBASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 AL645728.2-201ENST00000641974 660 ntBASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLHC1Q8NHS4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
CLHC1Q8NHS4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 AP001005.1-201ENST00000571755 1248 ntBASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CLHC1Q8NHS4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms