Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 AL355306.1-201ENST00000415580 579 ntBASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 C20orf181-201ENST00000623918 480 ntBASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 AC073439.1-201ENST00000624121 1774 ntBASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 AL671277.1-201ENST00000429656 993 ntBASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 HTR5BP-201ENST00000430851 1154 ntBASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 AC112482.1-201ENST00000492080 688 ntBASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 KRT8P48-201ENST00000515599 1220 ntBASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 MTDHP5-201ENST00000598980 586 ntBASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 AL596087.1-201ENST00000400979 1969 ntBASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.35■□□□□ 0.05
SIMC1Q8NDZ2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms