Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 STX1A-203ENST00000395155 783 ntTSL 2 BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 LINC01144-201ENST00000626198 1710 ntBASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.16■□□□□ 0.82
CARMIL3Q8ND23 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 RPL13P2-201ENST00000440687 659 ntBASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 MIR6869-201ENST00000619434 62 ntBASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
CARMIL3Q8ND23 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CARMIL3Q8ND23 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.14■□□□□ 0.82
CARMIL3Q8ND23 GGT3P-204ENST00000453783 1664 ntBASIC20.14■□□□□ 0.82
CARMIL3Q8ND23 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CARMIL3Q8ND23 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
CARMIL3Q8ND23 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 NKILA-202ENST00000614771 2598 ntBASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 KRT8P22-201ENST00000562317 1415 ntBASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.14■□□□□ 0.81
CARMIL3Q8ND23 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CARMIL3Q8ND23 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CARMIL3Q8ND23 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CARMIL3Q8ND23 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CARMIL3Q8ND23 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC20.13■□□□□ 0.81
CARMIL3Q8ND23 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CARMIL3Q8ND23 USB1-202ENST00000423271 1217 ntTSL 2 BASIC20.13■□□□□ 0.81
CARMIL3Q8ND23 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC20.13■□□□□ 0.81
CARMIL3Q8ND23 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CARMIL3Q8ND23 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CARMIL3Q8ND23 APRT-204ENST00000563655 709 ntTSL 5 BASIC20.13■□□□□ 0.81
CARMIL3Q8ND23 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CARMIL3Q8ND23 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.13■□□□□ 0.81
CARMIL3Q8ND23 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms