Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 NME2P1-201ENST00000426182 414 ntBASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 HIST3H2BA-201ENST00000436555 524 ntBASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 DOC2GP-202ENST00000514950 1163 ntBASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 AL592424.1-201ENST00000563624 1536 ntBASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 CROCCP1-201ENST00000426910 5675 ntBASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC38A9Q8NBW4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 PCDHA12-202ENST00000613593 2588 ntBASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 SDHAP3-202ENST00000515467 728 ntBASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 SRD5A3P1-201ENST00000603021 949 ntBASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 MIR6069-201ENST00000620069 79 ntBASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 REXO1L8P-201ENST00000604378 1897 ntBASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC38A9Q8NBW4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 COX5BP8-201ENST00000416911 349 ntBASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 AL589987.1-201ENST00000453380 819 ntBASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 CHCHD2P3-201ENST00000603038 451 ntBASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 AL358472.5-202ENST00000641448 1267 ntBASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms