Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 AL035456.1-201ENST00000456064 1369 ntBASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 AL512652.2-201ENST00000625156 1716 ntBASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 AL645728.1-201ENST00000366221 2101 ntBASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 AC009477.1-201ENST00000452936 217 ntBASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 AL391256.1-201ENST00000443260 1855 ntBASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHTF2Q8N3S3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 AL133215.2-201ENST00000609242 977 ntBASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 TEX28P1-201ENST00000613479 1221 ntBASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 TEX28P2-201ENST00000617764 1221 ntBASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 AC022144.1-201ENST00000602255 1580 ntBASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHTF2Q8N3S3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms