Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCUBE3Q8IX30 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCUBE3Q8IX30 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 AC018529.1-201ENST00000613063 361 ntBASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 AP001059.3-201ENST00000619053 235 ntBASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 AC026691.1-201ENST00000602502 2017 ntBASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SCUBE3Q8IX30 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 MIR770-201ENST00000390219 98 ntBASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 COX20P2-201ENST00000452636 358 ntBASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms