Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CREB3L3Q68CJ9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 RPSAP43-201ENST00000402237 625 ntBASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CREB3L3Q68CJ9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 AC134407.2-201ENST00000625089 1978 ntBASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 BX842568.4-201ENST00000421222 227 ntBASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 AC024267.1-201ENST00000582320 895 ntBASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 AL513210.1-201ENST00000629608 234 ntBASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 UXT-AS1-201ENST00000590504 1525 ntBASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CREB3L3Q68CJ9 PRAL-201ENST00000624952 3286 ntBASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 RNA5SP410-201ENST00000516285 106 ntBASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CREB3L3Q68CJ9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms