Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 KRT8P37-201ENST00000451609 1420 ntBASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 AL691432.1-201ENST00000596308 1422 ntBASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 AC005229.1-201ENST00000392885 409 ntBASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 SOCS2P1-201ENST00000417727 557 ntBASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 AL355864.2-201ENST00000447420 863 ntBASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 CSF2RBP1-201ENST00000447905 391 ntBASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 RPL13AP25-201ENST00000484130 612 ntBASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 AC068587.3-201ENST00000526613 355 ntBASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD4Q5XG99 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 GGT3P-204ENST00000453783 1664 ntBASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 AC020907.1-201ENST00000616460 1350 ntBASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 AC060834.1-201ENST00000443027 2032 ntBASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 AC134915.1-201ENST00000426461 574 ntBASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 RPL7P3-201ENST00000441388 714 ntBASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 EEF1DP4-201ENST00000446006 880 ntBASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 CROCCP1-201ENST00000426910 5675 ntBASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 AC141586.5-201ENST00000624546 2050 ntBASIC15.79■□□□□ 0.12
LYSMD4Q5XG99 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms