Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARS2Q5ST30 ALOX12P2-203ENST00000570921 1945 ntBASIC17.14■□□□□ 0.33
VARS2Q5ST30 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARS2Q5ST30 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VARS2Q5ST30 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VARS2Q5ST30 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARS2Q5ST30 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARS2Q5ST30 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 AC140912.1-201ENST00000577171 1054 ntBASIC17.14■□□□□ 0.33
VARS2Q5ST30 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 SRD5A3P1-201ENST00000603021 949 ntBASIC17.14■□□□□ 0.33
VARS2Q5ST30 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARS2Q5ST30 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 MIR6799-201ENST00000620297 69 ntBASIC17.14■□□□□ 0.33
VARS2Q5ST30 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARS2Q5ST30 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VARS2Q5ST30 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARS2Q5ST30 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VARS2Q5ST30 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARS2Q5ST30 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VARS2Q5ST30 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VARS2Q5ST30 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARS2Q5ST30 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VARS2Q5ST30 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.14■□□□□ 0.33
VARS2Q5ST30 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VARS2Q5ST30 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 COX5BP8-201ENST00000416911 349 ntBASIC17.13■□□□□ 0.33
VARS2Q5ST30 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 HIST3H2BA-201ENST00000436555 524 ntBASIC17.13■□□□□ 0.33
VARS2Q5ST30 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 AC093004.1-201ENST00000508850 424 ntBASIC17.13■□□□□ 0.33
VARS2Q5ST30 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.13■□□□□ 0.33
VARS2Q5ST30 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 REXO1L8P-201ENST00000604378 1897 ntBASIC17.13■□□□□ 0.33
VARS2Q5ST30 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
VARS2Q5ST30 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VARS2Q5ST30 AC011676.5-201ENST00000624864 2660 ntBASIC17.13■□□□□ 0.33
VARS2Q5ST30 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms