Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH17Q12864 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CDH17Q12864 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH17Q12864 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CDH17Q12864 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH17Q12864 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CDH17Q12864 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH17Q12864 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH17Q12864 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH17Q12864 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH17Q12864 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CDH17Q12864 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH17Q12864 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH17Q12864 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH17Q12864 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH17Q12864 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH17Q12864 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CDH17Q12864 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH17Q12864 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH17Q12864 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH17Q12864 AL355306.1-201ENST00000415580 579 ntBASIC16.42■□□□□ 0.22
CDH17Q12864 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.42■□□□□ 0.22
CDH17Q12864 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.42■□□□□ 0.22
CDH17Q12864 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.42■□□□□ 0.22
CDH17Q12864 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH17Q12864 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH17Q12864 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH17Q12864 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CDH17Q12864 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH17Q12864 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH17Q12864 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH17Q12864 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.42■□□□□ 0.22
CDH17Q12864 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH17Q12864 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH17Q12864 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH17Q12864 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH17Q12864 AL162727.3-201ENST00000635661 2787 ntBASIC16.42■□□□□ 0.22
CDH17Q12864 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH17Q12864 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH17Q12864 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH17Q12864 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
CDH17Q12864 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH17Q12864 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH17Q12864 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH17Q12864 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH17Q12864 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH17Q12864 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH17Q12864 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH17Q12864 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH17Q12864 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH17Q12864 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH17Q12864 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CDH17Q12864 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH17Q12864 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH17Q12864 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH17Q12864 AL671277.1-201ENST00000429656 993 ntBASIC16.41■□□□□ 0.22
CDH17Q12864 FAM58CP-201ENST00000435741 640 ntBASIC16.41■□□□□ 0.22
CDH17Q12864 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH17Q12864 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH17Q12864 AC105233.2-201ENST00000523697 349 ntBASIC16.41■□□□□ 0.22
CDH17Q12864 KRT18P58-201ENST00000527480 1120 ntBASIC16.41■□□□□ 0.22
CDH17Q12864 FAM86C2P-203ENST00000528684 1004 ntBASIC16.41■□□□□ 0.22
CDH17Q12864 AF228730.5-201ENST00000530288 346 ntBASIC16.41■□□□□ 0.22
CDH17Q12864 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH17Q12864 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH17Q12864 AL135744.1-201ENST00000565098 629 ntBASIC16.41■□□□□ 0.22
CDH17Q12864 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH17Q12864 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CDH17Q12864 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CDH17Q12864 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH17Q12864 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH17Q12864 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH17Q12864 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH17Q12864 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH17Q12864 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH17Q12864 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH17Q12864 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH17Q12864 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH17Q12864 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH17Q12864 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH17Q12864 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.4■□□□□ 0.22
CDH17Q12864 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH17Q12864 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH17Q12864 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH17Q12864 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CDH17Q12864 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH17Q12864 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH17Q12864 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH17Q12864 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDH17Q12864 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH17Q12864 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH17Q12864 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDH17Q12864 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms