Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.85■□□□□ 0.61
SSRP1Q08945 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSRP1Q08945 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSRP1Q08945 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSRP1Q08945 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.85■□□□□ 0.61
SSRP1Q08945 HAUS4P1-201ENST00000406739 1145 ntBASIC18.85■□□□□ 0.61
SSRP1Q08945 AC245100.5-201ENST00000452108 331 ntBASIC18.85■□□□□ 0.61
SSRP1Q08945 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.85■□□□□ 0.61
SSRP1Q08945 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SSRP1Q08945 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSRP1Q08945 SLC25A39P2-201ENST00000537614 270 ntBASIC18.85■□□□□ 0.61
SSRP1Q08945 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.85■□□□□ 0.61
SSRP1Q08945 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSRP1Q08945 AC008741.2-201ENST00000612792 3115 ntBASIC18.85■□□□□ 0.61
SSRP1Q08945 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SSRP1Q08945 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.85■□□□□ 0.61
SSRP1Q08945 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.85■□□□□ 0.61
SSRP1Q08945 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.85■□□□□ 0.61
SSRP1Q08945 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SSRP1Q08945 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSRP1Q08945 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSRP1Q08945 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSRP1Q08945 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.85■□□□□ 0.61
SSRP1Q08945 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.85■□□□□ 0.61
SSRP1Q08945 AC010491.1-201ENST00000563101 2797 ntBASIC18.85■□□□□ 0.61
SSRP1Q08945 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSRP1Q08945 FER1L4-210ENST00000615531 5998 ntBASIC18.85■□□□□ 0.61
SSRP1Q08945 LINC02447-202ENST00000501888 2146 ntBASIC18.85■□□□□ 0.61
SSRP1Q08945 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
SSRP1Q08945 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSRP1Q08945 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.85■□□□□ 0.61
SSRP1Q08945 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSRP1Q08945 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSRP1Q08945 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.84■□□□□ 0.61
SSRP1Q08945 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSRP1Q08945 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSRP1Q08945 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.84■□□□□ 0.61
SSRP1Q08945 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSRP1Q08945 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSRP1Q08945 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.84■□□□□ 0.61
SSRP1Q08945 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSRP1Q08945 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.84■□□□□ 0.61
SSRP1Q08945 AC069224.1-201ENST00000566372 1715 ntBASIC18.84■□□□□ 0.61
SSRP1Q08945 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSRP1Q08945 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SSRP1Q08945 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.84■□□□□ 0.61
SSRP1Q08945 AC004461.1-201ENST00000412461 403 ntBASIC18.84■□□□□ 0.61
SSRP1Q08945 AC211486.1-202ENST00000416371 468 ntBASIC18.84■□□□□ 0.61
SSRP1Q08945 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.84■□□□□ 0.61
SSRP1Q08945 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SSRP1Q08945 AC211476.1-201ENST00000503899 468 ntBASIC18.84■□□□□ 0.61
SSRP1Q08945 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
SSRP1Q08945 RNA5SP410-201ENST00000516285 106 ntBASIC18.84■□□□□ 0.61
SSRP1Q08945 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.84■□□□□ 0.61
SSRP1Q08945 AC061975.2-201ENST00000581722 295 ntBASIC18.84■□□□□ 0.61
SSRP1Q08945 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.84■□□□□ 0.61
SSRP1Q08945 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.84■□□□□ 0.61
SSRP1Q08945 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.84■□□□□ 0.61
SSRP1Q08945 AC084121.4-201ENST00000641598 221 ntBASIC18.84■□□□□ 0.61
SSRP1Q08945 AF228730.8-201ENST00000642140 221 ntBASIC18.84■□□□□ 0.61
SSRP1Q08945 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSRP1Q08945 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.84■□□□□ 0.61
SSRP1Q08945 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSRP1Q08945 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSRP1Q08945 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSRP1Q08945 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SSRP1Q08945 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSRP1Q08945 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.84■□□□□ 0.61
SSRP1Q08945 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSRP1Q08945 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSRP1Q08945 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.84■□□□□ 0.61
SSRP1Q08945 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSRP1Q08945 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSRP1Q08945 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
SSRP1Q08945 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
SSRP1Q08945 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SSRP1Q08945 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSRP1Q08945 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSRP1Q08945 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.83■□□□□ 0.61
SSRP1Q08945 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSRP1Q08945 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSRP1Q08945 AC008894.3-201ENST00000624324 3103 ntBASIC18.83■□□□□ 0.61
SSRP1Q08945 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
SSRP1Q08945 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
SSRP1Q08945 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.83■□□□□ 0.61
SSRP1Q08945 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SSRP1Q08945 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.83■□□□□ 0.61
SSRP1Q08945 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSRP1Q08945 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SSRP1Q08945 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
SSRP1Q08945 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSRP1Q08945 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SSRP1Q08945 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSRP1Q08945 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
SSRP1Q08945 FAM220BP-201ENST00000377689 816 ntBASIC18.83■□□□□ 0.6
SSRP1Q08945 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSRP1Q08945 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.83■□□□□ 0.6
SSRP1Q08945 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
SSRP1Q08945 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.83■□□□□ 0.6
SSRP1Q08945 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms