Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.89■□□□□ 0.77
DDR1Q08345 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
DDR1Q08345 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDR1Q08345 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDR1Q08345 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
DDR1Q08345 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.89■□□□□ 0.77
DDR1Q08345 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
DDR1Q08345 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.89■□□□□ 0.77
DDR1Q08345 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDR1Q08345 CNN2P8-201ENST00000421872 913 ntBASIC19.89■□□□□ 0.77
DDR1Q08345 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.89■□□□□ 0.77
DDR1Q08345 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
DDR1Q08345 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.89■□□□□ 0.77
DDR1Q08345 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDR1Q08345 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
DDR1Q08345 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
DDR1Q08345 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.89■□□□□ 0.77
DDR1Q08345 SLED1-202ENST00000512051 380 ntBASIC19.89■□□□□ 0.77
DDR1Q08345 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.89■□□□□ 0.77
DDR1Q08345 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.89■□□□□ 0.77
DDR1Q08345 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC19.89■□□□□ 0.77
DDR1Q08345 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
DDR1Q08345 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.89■□□□□ 0.77
DDR1Q08345 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDR1Q08345 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
DDR1Q08345 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.89■□□□□ 0.77
DDR1Q08345 AL133373.2-201ENST00000623187 2828 ntBASIC19.89■□□□□ 0.77
DDR1Q08345 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.89■□□□□ 0.77
DDR1Q08345 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
DDR1Q08345 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDR1Q08345 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDR1Q08345 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDR1Q08345 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.88■□□□□ 0.77
DDR1Q08345 NOC2LP2-201ENST00000407594 1944 ntBASIC19.88■□□□□ 0.77
DDR1Q08345 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 AL607033.1-201ENST00000623900 1599 ntBASIC19.88■□□□□ 0.77
DDR1Q08345 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
DDR1Q08345 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
DDR1Q08345 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.88■□□□□ 0.77
DDR1Q08345 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.88■□□□□ 0.77
DDR1Q08345 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
DDR1Q08345 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
DDR1Q08345 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.88■□□□□ 0.77
DDR1Q08345 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
DDR1Q08345 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.88■□□□□ 0.77
DDR1Q08345 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
DDR1Q08345 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
DDR1Q08345 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.88■□□□□ 0.77
DDR1Q08345 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.88■□□□□ 0.77
DDR1Q08345 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.88■□□□□ 0.77
DDR1Q08345 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.88■□□□□ 0.77
DDR1Q08345 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.88■□□□□ 0.77
DDR1Q08345 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.88■□□□□ 0.77
DDR1Q08345 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
DDR1Q08345 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC19.88■□□□□ 0.77
DDR1Q08345 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.88■□□□□ 0.77
DDR1Q08345 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
DDR1Q08345 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
DDR1Q08345 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DDR1Q08345 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
DDR1Q08345 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.88■□□□□ 0.77
DDR1Q08345 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 AC068880.1-201ENST00000507289 2297 ntBASIC19.87■□□□□ 0.77
DDR1Q08345 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.87■□□□□ 0.77
DDR1Q08345 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 CALR4P-201ENST00000431943 946 ntBASIC19.87■□□□□ 0.77
DDR1Q08345 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.87■□□□□ 0.77
DDR1Q08345 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.87■□□□□ 0.77
DDR1Q08345 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.87■□□□□ 0.77
DDR1Q08345 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms