Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LTBQ06643 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.88□□□□□ -0.03
LTBQ06643 AC005622.1-201ENST00000636801 1703 ntBASIC14.88□□□□□ -0.03
LTBQ06643 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
LTBQ06643 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LTBQ06643 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LTBQ06643 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LTBQ06643 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.88□□□□□ -0.03
LTBQ06643 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.88□□□□□ -0.03
LTBQ06643 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LTBQ06643 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.88□□□□□ -0.03
LTBQ06643 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.87□□□□□ -0.03
LTBQ06643 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.87□□□□□ -0.03
LTBQ06643 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LTBQ06643 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LTBQ06643 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LTBQ06643 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.87□□□□□ -0.03
LTBQ06643 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.87□□□□□ -0.03
LTBQ06643 AC005034.1-201ENST00000426657 489 ntBASIC14.87□□□□□ -0.03
LTBQ06643 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.87□□□□□ -0.03
LTBQ06643 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
LTBQ06643 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.87□□□□□ -0.03
LTBQ06643 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.87□□□□□ -0.03
LTBQ06643 KRT19P2-202ENST00000557173 1012 ntBASIC14.87□□□□□ -0.03
LTBQ06643 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.87□□□□□ -0.03
LTBQ06643 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.87□□□□□ -0.03
LTBQ06643 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.87□□□□□ -0.03
LTBQ06643 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LTBQ06643 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.87□□□□□ -0.03
LTBQ06643 AC138761.1-201ENST00000584393 385 ntBASIC14.87□□□□□ -0.03
LTBQ06643 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.87□□□□□ -0.03
LTBQ06643 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LTBQ06643 TSPY26P-202ENST00000565928 3884 ntBASIC14.87□□□□□ -0.03
LTBQ06643 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.87□□□□□ -0.03
LTBQ06643 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.87□□□□□ -0.03
LTBQ06643 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.87□□□□□ -0.03
LTBQ06643 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LTBQ06643 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LTBQ06643 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.87□□□□□ -0.03
LTBQ06643 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LTBQ06643 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LTBQ06643 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
LTBQ06643 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.87□□□□□ -0.03
LTBQ06643 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
LTBQ06643 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBQ06643 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBQ06643 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.86□□□□□ -0.03
LTBQ06643 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.86□□□□□ -0.03
LTBQ06643 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LTBQ06643 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBQ06643 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LTBQ06643 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LTBQ06643 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LTBQ06643 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.86□□□□□ -0.03
LTBQ06643 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LTBQ06643 HYMAI-201ENST00000635591 3347 ntBASIC14.86□□□□□ -0.03
LTBQ06643 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBQ06643 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBQ06643 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.86□□□□□ -0.03
LTBQ06643 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBQ06643 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
LTBQ06643 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LTBQ06643 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.86□□□□□ -0.03
LTBQ06643 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LTBQ06643 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LTBQ06643 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.86□□□□□ -0.03
LTBQ06643 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.86□□□□□ -0.03
LTBQ06643 AC190387.1-201ENST00000551683 408 ntBASIC14.86□□□□□ -0.03
LTBQ06643 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.86□□□□□ -0.03
LTBQ06643 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.86□□□□□ -0.03
LTBQ06643 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.86□□□□□ -0.03
LTBQ06643 AL035252.4-201ENST00000624174 288 ntBASIC14.86□□□□□ -0.03
LTBQ06643 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.86□□□□□ -0.03
LTBQ06643 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
LTBQ06643 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBQ06643 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBQ06643 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.86□□□□□ -0.03
LTBQ06643 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
LTBQ06643 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBQ06643 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms